|
Name : SM11_chr1381 (SM11_chr1381) Accession : YP_005719918.1 Strain : Sinorhizobium meliloti SM11 Genome accession: NC_017325 Putative virulence/resistance : Unknown Product : putative peptide transport ATP-binding ABC transporter protein Function : - COG functional category : - COG ID : - EC number : - Position : 1406269 - 1408050 bp Length : 1782 bp Strand : + Note : ATPase components of various ABC-type transport systems, contain duplicated ATPase DNA sequence : ATGACTTCCTCTCTGCTTTCCGTGAAGGATCTGACCGTCCAGGTGGCTACGCCGACCGGGCCGAAGGTCGTGGTGGAGCG TCTGTCCTTCGATCTTCTTCCCGGCAGGACGCTTTGTCTTGCAGGCGAGAGCGGATCGGGTAAATCGATGACCGCGCTTT CGCTGATGCAGTTGCTGCCGAAGCCGATGGCACGAATTGCGGGCGGCTCGGCCACTCTCGATGGCGAGGACATATTGGCG CTTCCGGAAGCACGCATGCGGCGGATTCGCGGGCGCAAGATCGGGATGATCTTCCAGGAGCCGATGACCTCGCTCAATCC GGTGATGACGGTCGGAAATCAGCTGATCGGGGCGATCACCGCCCACGGAAACACCAGTGGCCGGCGCGCCGCGCGGGCGC GGGCCGCCGAACTCCTGGACCAGGTTCAGATTCCGGAGCCGGAGCGGCGGCTCGGCCAATATCCGCACGAGCTCTCCGGC GGCTTGCGTCAGCGAATCGTCATCGCGATGGCGCTCGCGCAAAACCCGAAAATCCTGATCGCCGACGAGCCGACGACGGC GCTCGACGTAACGGTTCAGGCGCAGATCCTGGCCCTTATCCGCAAGCTGCAGGCCGATCACGGGATTTCGGTGATCATGA TCACCCATGACATGGGCGTGGTCGCGGAAATGGCCGACGAGGTGCTGGTGATGAAGCATGGCCGTACCGTGGAGCACGCA ACCAGCAGGGATCTTTTCGCGCATCCGCAGGATGCGTACACGAAGGAGCTCCTATCCGCCGTGCCGCGCCTTGGCGAAAT GGCGGGAACGGAGACGCCGAAGCGTGCAGCGGGGAAGGCGGTCGAGGCAGGATCTGAGCCAGGCGCCGAACAGCCGATGC TCCAGGTCGAGAACCTCACGGTTCGTTTCGACATAAAGGGCGGCATCCTTCAGCGCCCGGTCAGGCGACTTCACGCGGTG GAGGGCATCTCTTTGTCCGTGCGCAGGGGTGAGACGCTGTCTCTCGTCGGAGAGTCCGGTTGCGGCAAGTCGACGACCGG CAAGGCGCTCTTGAACCTTGTCCCGTGGACGGGAGACATACGCGTCGACGGACGCTCCACGCGCGGCTTGCGAGGGAGCA CGATGCGGCCCATCCTGCGTGACGTCCAGATGATCTTCCAGGACCCTTACGCATCGCTGGATCCGCGTATGCGGGTCGGC GATCTGGTGGCCGAGCCACTTGTGATCCACGGCCTTGCAAGCGGAAGCGAGCTGCGTGACCGGGTGGAGTATCTTTTCAA GCGGGTCGGATTGTCGCCCGAGCAGATGAAGCGTTACCCGCATGAGTTTTCGGGCGGTCAGCGGCAGCGCATCTGTATCG CGCGCGCCCTGTCTCTCTCACCGAAGCTCATCGTCGCAGATGAGTCCGTCGCGGCACTCGACGTGTCGATCCAGGCACAG GTGCTCGATCTCCTGCAGGACATCCAGGACGAGACCGGCGTCTCCTACCTGTTTATTTCGCACGACATGGCGGTCGTCGA GCAGATCAGCCACCGGGTAGCGGTCATGTACATGGGCCGCTTCGTCGAAATGGGCACGCGGCGGCAGATCTTCGAGAGTC CGCAGCATCCCTATACGAAGAAACTGATGGCAGCCGTTCCCGTGGCCGATCCGGGCCGAGTACGCCGGGATTTCGTGCCG AAAGCGGAAGACCTGCCGAGTCCTGTGCGCGCCCTGGATTATGCGCCATCCTTCCCGCCGCCATCGGATCTGGGCGGCGG ACATCTCGTCTGGAACGGCTAA Protein sequence : MTSSLLSVKDLTVQVATPTGPKVVVERLSFDLLPGRTLCLAGESGSGKSMTALSLMQLLPKPMARIAGGSATLDGEDILA LPEARMRRIRGRKIGMIFQEPMTSLNPVMTVGNQLIGAITAHGNTSGRRAARARAAELLDQVQIPEPERRLGQYPHELSG GLRQRIVIAMALAQNPKILIADEPTTALDVTVQAQILALIRKLQADHGISVIMITHDMGVVAEMADEVLVMKHGRTVEHA TSRDLFAHPQDAYTKELLSAVPRLGEMAGTETPKRAAGKAVEAGSEPGAEQPMLQVENLTVRFDIKGGILQRPVRRLHAV EGISLSVRRGETLSLVGESGCGKSTTGKALLNLVPWTGDIRVDGRSTRGLRGSTMRPILRDVQMIFQDPYASLDPRMRVG DLVAEPLVIHGLASGSELRDRVEYLFKRVGLSPEQMKRYPHEFSGGQRQRICIARALSLSPKLIVADESVAALDVSIQAQ VLDLLQDIQDETGVSYLFISHDMAVVEQISHRVAVMYMGRFVEMGTRRQIFESPQHPYTKKLMAAVPVADPGRVRRDFVP KAEDLPSPVRALDYAPSFPPPSDLGGGHLVWNG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 2e-93 | 42 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-70 | 41 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-70 | 41 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 4e-70 | 41 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 4e-70 | 41 |
