Gene Information

Name : SM11_chr1363 (SM11_chr1363)
Accession : YP_005719900.1
Strain : Sinorhizobium meliloti SM11
Genome accession: NC_017325
Putative virulence/resistance : Unknown
Product : putative ABC transporter ATP-binding protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1384219 - 1385265 bp
Length : 1047 bp
Strand : -
Note : ABC-type sugar transport systems, ATPase components

DNA sequence :
ATGGCTAGTCACGCAATCGAGGTGAAGAACCTCTACAAGATTTTCGGCCCGCGCGGGGAGGATTACGTCAAGCTCGTCGA
GAACGGGATGGGTAAGGCCGAACTCAACGAAAAGCACGGCCACGTGCTCGGACTGCAGGACATCAACATTTCCATGCCTG
GCGGCTGCATAACGGTCGTGATGGGGCTCTCGGGGTCCGGCAAATCGACGCTGATCCGGCACATCAACCGGCTGATCGAT
CCGACCTCCGGCGAAGTCCTCTACGACGGCGTCGACGTCTGCAAGATGAACGAGAACGACCTTCGCGCATTCCGCCGCCA
CAAGACGGCGATGGTCTTTCAGAAATTTGCACTGCTGCCGCATCGCACGGTTCTCGAGAACACCATCTACGGTCTGGAGA
TCCAAGGCGTGGACCGGCGCGAGAGCGAGAAGCGTGCGCTTGGCTGGATCGAGCGCGTCGGCCTTCAAGGCTTCGAAAAG
CACTATCCGAACCAGCTTTCCGGCGGCATGCAGCAGCGCGTCGGCCTTGCCCGCGCACTTACAAACGACGCCGACATACT
GCTGATGGACGAAGCCTATTCGGCACTCGATCCGCTGATACGCGTCGACATGCAGTCGGTGCTGCTCGAACTGCAGAAGG
AGTTGAAGAAGACGGTGGTGTTCATCACCCACGATCTCGACGAGGCCCTGAGGCTCGGCGACAAGATCGCCATCCTGCGC
GACGGCCGCGTCGTGCAGCAGGGAACCGGCCAGGAAATCGTGCTCTCGCCGGCCGACGACTACATCACGGCCTTTGTGAA
GGAAGTGAACCGCGGGCGGGTGGTCAACGTGGAAACGATCATGCGGCCGCTGTCCGGCAATCCGGAAGGCCTGCCGCTCG
CCGCAGGCACCGTGCTCGAAGCCGCCGCCCGCACCATGACCGGCGCGCAAATAAGCAATGCGCATGTCGTCGACGCCAAT
GGCCGCCCGATCGGTGCGATCGACCTGCAGATGATCATCTCCGCCATGGTGACGCCCGTGCAGCATACCGACCGGCAGGC
GGCTTGA

Protein sequence :
MASHAIEVKNLYKIFGPRGEDYVKLVENGMGKAELNEKHGHVLGLQDINISMPGGCITVVMGLSGSGKSTLIRHINRLID
PTSGEVLYDGVDVCKMNENDLRAFRRHKTAMVFQKFALLPHRTVLENTIYGLEIQGVDRRESEKRALGWIERVGLQGFEK
HYPNQLSGGMQQRVGLARALTNDADILLMDEAYSALDPLIRVDMQSVLLELQKELKKTVVFITHDLDEALRLGDKIAILR
DGRVVQQGTGQEIVLSPADDYITAFVKEVNRGRVVNVETIMRPLSGNPEGLPLAAGTVLEAAARTMTGAQISNAHVVDAN
GRPIGAIDLQMIISAMVTPVQHTDRQAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuAA YP_281521.1 glycine betaine transport ATP-binding protein Not tested Not named Protein 9e-76 52
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 6e-39 41
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 5e-39 41