Name : SM11_chr0130 (SM11_chr0130) Accession : YP_005718678.1 Strain : Sinorhizobium meliloti SM11 Genome accession: NC_017325 Putative virulence/resistance : Virulence Product : putative major antigenic peptide PEB Function : - COG functional category : - COG ID : - EC number : - Position : 140468 - 141304 bp Length : 837 bp Strand : + Note : Accessory colonization factor AcfC, contains ABC-type periplasmic domain DNA sequence : ATGATGTGGCGGTCAACTACGGACAACAAGGAGAAGCCCGTGCGAATTGCAGTTCTGATTGTTCTGACGACTGTCCTTGC CATGCCTGCTTCGGCGCAGGATACCGCACTCCATGACCCTTCGATCAGCCGCGATGCACAGGACGGGGTGATCCGTCTTT ACGGTGCGGGCGGTCCGGACACCGCCATCCGGAAAGTCGCGGATGTCTGGACGAAGGAGACGGGCCGCAAGGTCGAAATC ACCGCCGGACCGGAGAAGACATGGTCGAAAAAGGCGCAGGGCGATGCGGATGTCATCTGGGGCACGTCCGAACAGGCGAT GACCGCTTTTCTCGAAACCTATAAGGGCTTCTCATCGGATCAGGTCGAGCCGATATACCTTCGTCCGGCAGTCATTGCGG TGAAAGCGGGCAATCCCAAGGGGATCATGAAATTCGAGGACCTTCTGGCGGAAGGGACGAAAATCGTCGTAACCGAAGGA GCCGGCGTCGCCAACACGTCGGGGACGGGTGTGTGGGAGGATATCGCGGGGCGTCTTGGCCGGCTGGAGGATGTCGCGGC CTTCCGCAGCAACATCGTCGCTTTCGAACAGGGCTCCGGCGCAAGCTTCAAGGCGTTCAAAGCATTGGATGCAGACGCCT GGATCACCTGGCCGAATTGGCCGCTTTCGAACCCCGACACCCTGGAGGCGGTGCCGCTGTCGAGCGATCGCGCAATATGG CGCGACCTCAGCGTGGCCCTGGCCCCCGACGCCGATCCCGATGCAAAGGCGTTTCTGGATTATCTGATCTCCGATGAGGC GCAGAAGATCATGTCCCGTGAAGGTTGGGTACGCTGA Protein sequence : MMWRSTTDNKEKPVRIAVLIVLTTVLAMPASAQDTALHDPSISRDAQDGVIRLYGAGGPDTAIRKVADVWTKETGRKVEI TAGPEKTWSKKAQGDADVIWGTSEQAMTAFLETYKGFSSDQVEPIYLRPAVIAVKAGNPKGIMKFEDLLAEGTKIVVTEG AGVANTSGTGVWEDIAGRLGRLEDVAAFRSNIVAFEQGSGASFKAFKALDADAWITWPNWPLSNPDTLEAVPLSSDRAIW RDLSVALAPDADPDAKAFLDYLISDEAQKIMSREGWVR |
Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
acfC | AAK20798.1 | accessory colonization factor AcfC | Virulence | VPI | Protein | 2e-36 | 44 |
acfC | AAA82706.1 | AcfC | Virulence | VPI | Protein | 2e-36 | 44 |
acfC | AAK20768.1 | accessory colonization factor AcfC | Virulence | VPI | Protein | 2e-36 | 44 |
VC0841 | NP_230489.1 | accessory colonization factor AcfC | Virulence | VPI-1 | Protein | 2e-36 | 44 |
acfC | YP_001216322.1 | accessory colonization factor AcfC | Virulence | VPI-1 | Protein | 2e-36 | 44 |
Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
SM11_chr0130 | YP_005718678.1 | putative major antigenic peptide PEB | VFG0105 | Protein | 1e-36 | 44 |
SM11_chr0130 | YP_005718678.1 | putative major antigenic peptide PEB | VFG0839 | Protein | 3e-35 | 42 |