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Name : SinmeB_5857 (SinmeB_5857) Accession : YP_005717814.1 Strain : Genome accession: NC_017324 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 786293 - 787843 bp Length : 1551 bp Strand : - Note : PFAM: Integrase, catalytic core; RNA polymerase sigma factor 70, region 4 type 2; KEGG: ret:RHE_PA00009 IS21/IS408/IS1162 insertion sequence transposase protein DNA sequence : ATGCCTGCGGAGAGACTGGAGATGCGGCGTGTCCGCGAGATATTGAGATATCGCTTCGAACAAGGACTTGGCCACAAGTC GATCGCGGTTCGGGTTGGAGCTGCGCCATCGACGGTGCGCGAGACGCTTCGGCGTGCGGCCATTGCGGAGCTATCGTGGC CGTTGGGTGACGACGTCAGCGATGCAGTCCTGGAAGCGGCGCTTTACAAGGCAGCCGGGACGAAGACGGGTCATCGTCGG AGCCCTGAGCCGGACTGGGCGCAGGTCCACCGCGAGCTGAAGCGCAAGCATATGACGCTGCAGATCCTTTGGGACGAATA CATCAGCCGTTATCCGGAGGGCTATCGCTACAGTCGCTTCTGTGACCTCTACCGCGGCTGGGCGATGAAGTTGCCTGTGA CGATGCGGCAGGATCACGCGGCCGGCGACAAGCTGTTCGTCGACTACGCCGGCGACACGGTCACGGTTGTCGTTGATCGG CTGTCCGGCAAGACACGGCAGGCGCACCTGTTCGTGGCGGTTCTGGGAGCATCCAGCCTTTCATATGCGCAGGCACGTTG GAGCGAGACGCTTCCCGACTGGATTGAATGCCATATCCTGGCGCTGGAGTTCTTTGGCGGTGCGCCAGCCTTGTTGGTTC CCGACAATGCCAAGGTAGCGATCATCAAGGCCTGCCACTTCGATCCCCAGGTCAACCGGACGTATTGCGGGATGGCGGCC CATTATGGCAGCGCCGTCTTGCCGACGCGGCCGCGACGCCCGCGGGACAAGGCGAAAGTGGAAGCTGCGGTTCGTATCGT CGAACGCTGGCTATTGGGCCGGCTGCGCCATCGCATCTTCTATAGTTTGGCCGAGGTCAATGCCGCGATCGGCGAACTGC TTCATGACCTCAATGACAAACGAGTCCTGCGCCGCGTTGGCGTCACCCGCCGCCAATTGTTCGAAGAGCTTGATCGTCCG GCTTTGCGACCGCTGCCTGTCGAACGTTATGTCTTTGCCGAATGGCGTATCCGGCGTGCCGGGCTGGATTATCACGTCGA GATCGAGCGGCACTATTATTCCGTTCCCTATCGCTTTGCCCGCGAGCAGGTCGAGGCTCGTATCACCGCCAATACGATCG AGATCTTCCACAAGGGCGAGCGAATTGCCGCTCACCGGCGCTCCAGCGGCAACGGCAAGCACACGACGATCCCCGATCAT ATGCCCTCTGCGCATCGCCGCTTTGCCGACTGGACGATTGAACGGATTCAACGCGAAGCCTCTGCGATGGGGCCGGATGT TGCGCTGTTGTGCGAGCGCATTCTTGCCGACAGGCCTCATCCCGAGCAGGGCTTTCGAGCTTGCCTCGGCATCATCCGCC TCAACAAGAGCTTCGGCCGCGACAGGGTCAATGCCGCTTGCGGCCGTGCGTTGGAGATTGGCGCACGAACCTATGGCTCG GTGCGATCCATCCTCGACAATCACCTTGATCGAACGGCTGCCTCAAATGGAGCGGCGTCGCATGAACCGATCCATCACGC CAACATCCGCGGCCCCCGCTATTACCACTAA Protein sequence : MPAERLEMRRVREILRYRFEQGLGHKSIAVRVGAAPSTVRETLRRAAIAELSWPLGDDVSDAVLEAALYKAAGTKTGHRR SPEPDWAQVHRELKRKHMTLQILWDEYISRYPEGYRYSRFCDLYRGWAMKLPVTMRQDHAAGDKLFVDYAGDTVTVVVDR LSGKTRQAHLFVAVLGASSLSYAQARWSETLPDWIECHILALEFFGGAPALLVPDNAKVAIIKACHFDPQVNRTYCGMAA HYGSAVLPTRPRRPRDKAKVEAAVRIVERWLLGRLRHRIFYSLAEVNAAIGELLHDLNDKRVLRRVGVTRRQLFEELDRP ALRPLPVERYVFAEWRIRRAGLDYHVEIERHYYSVPYRFAREQVEARITANTIEIFHKGERIAAHRRSSGNGKHTTIPDH MPSAHRRFADWTIERIQREASAMGPDVALLCERILADRPHPEQGFRACLGIIRLNKSFGRDRVNAACGRALEIGARTYGS VRSILDNHLDRTAASNGAASHEPIHHANIRGPRYYH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_3528 | YP_854247.1 | transposase for ISEc12 | Not tested | PAI I APEC-O1 | Protein | 9e-110 | 44 |
| unnamed | CAC39294.1 | hypothetical protein | Not tested | LPA | Protein | 1e-109 | 44 |
| ORF_6 | AAZ04417.1 | putative transposase subunit | Not tested | PAI I APEC-O1 | Protein | 6e-110 | 44 |
| VPI2_0005c | ACA01822.1 | IstA | Not tested | VPI-2 | Protein | 8e-101 | 41 |
