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Name : SinmeB_5818 (SinmeB_5818) Accession : YP_005717782.1 Strain : Genome accession: NC_017324 Putative virulence/resistance : Virulence Product : lysine decarboxylase Function : - COG functional category : - COG ID : - EC number : 4.1.1.18 Position : 745498 - 747768 bp Length : 2271 bp Strand : - Note : KEGG: smd:Smed_5196 lysine decarboxylase; PFAM: Orn/Lys/Arg decarboxylase, major domain; Orn/Lys/Arg decarboxylase, C-terminal; Orn/Lys/Arg decarboxylase, N-terminal DNA sequence : ATGGAGTTCTACAAGGCATTCCCCATCGCTGTGATCGATGAAGATTACGAGGGTAAAAGCGCGGCCGGGCGGGGCATGCG CAGCCTCGCAGAGGCGATTGAAAAGGAAGGTTATCGGGTCGTTGCAGGGCTCAGCTATGAGGATGCACGCCGCCTCGTGA ACGTCTTCAACACCGAGTCTTGCTGGCTGATTTCAGTCGACCGGACGGAATCAAGTACGACACGCTGGGAGATTTTAGCC GAGCTGCTCGCCGCGAAACGCTCCCGGAACAACCTGCTGCCAATCTTTCTGTTTGGCGACGATACAACGGCGGAAATGGT GCCGGCGCCCGTGCTGCGCCACGCCAATGCCTTTATGCGTCTTTTCGAGGATTCTCCGGAATTCATGGCGCGCGCGATCG TGCGCGCGGCGCAGAATTATCTTGAGAGGCTTCCGCCTCCAATGTTCAAGGCGTTGATGGAATACACGCTTCACGGCGCC TATTCCTGGCACACGCCAGGGCACGGAGGCGGGGTGGCGTTTCGCAAGAGCCCGGTTGGCCAGCTCTTTTATACGTTTTT TGGAGAGAACACATTGAGGTCGGACATTTCTGTGTCCGTCGGCAGCGTTGGTTCGCTCCTCGATCATGTTGGGCCGATTG GCGAGGGTGAGCGCAATGCCGCTCGCATATTTGGTGCGGATGAGACGCTGTTCGTTGTCGGCGGCACATCGACCGCCAAT AAGATCGTGTGGCAGGGTATGGTCACTCGGAACGACCTCGTCCTCTGCGACCGAAACTGCCATAAGTCTATCCTGCACTC GCTGATCATGACGGGTGCAACGCCGATTTACCTGACGCCCTCACGCAACGGCCTCGGCATCATCGGACCGATTGCGAAGG AGCAGTTTACCCCAGAGGCAATCGCGCACAAGATCGCCGCCAGTCCGTTTGCCAGTGAGACGAACGGTAAAGTGCGCCTG ATGGTAGTGACAAACTCCACCTATGATGGGCTCTGCTACAATGTAGATGGAATCAAATCGGCGCTCGGCGATGCGGTGGA GGTACTGCATTTCGACGAGGCCTGGTTTGCTTACGCCAATTTTCACGAATTCTACGATGGTTATCACGCGATCTCTTCAA CGAAGCCCGCGCGCTCGCAAGAAGCCATCACATTCGCAACCCAGTCCACGCACAAGCTGCTGGCCGCCTTCTCTCAAGCT TCAATGCTTCATGTGCAGCATGCCGTGGCGAAGCAACTCGACATCACACGCTTCAACGAAGCGTTCATGATGCACACATC GACATCGCCGCAATATGGGATCATCGCCTCGTGCGACGTGGCTGCTGCCATGATGGAGCAGCCCGCCGGGCGGGCGCTGG TACAGGAGACCATTGACGAAGCCATGAGTTTCCGCCGAGCCGTCAACGCCGTGCGGACACAGATGCAGGATTCCTGGTGG TTCGAAGTCTGGGAGCCCCCCATCGCGGATCGGGCCCCGAGCGACGCCACGTCGGATTGGCTTCTAAAGCCCGGTGACGC TTGGCATGGTTTCGAAGACCTGGCTGAGAATCACGTTATGGTTGACCCGATCAAGGTCACGATCCTTTCGCCCGGACTCA ATGCGGGCGGAGCGATGCTGGAGCATGGTATTCCGGCTGCAGTCGTCACGAAGTTCCTTTCTTCTCGCCGGATCGAAATC GAGAAAACCGGCCTTTACTCTTTCCTGGTGCTCTTCTCCATGGGGATCACACGGGGCAAGTGGAGCACCCTGATCACCGA GCTCTTGAACTTCAAAGACCTCTATGATGCCAATGCGCCTCTTTCACGCGCCCTTCCCGCCCTCGCGGCAGCCCATCCCG ATGTCTACCGTGCAATGGGCCTTAGAGATCTTTGCGAGAAAATTCACGACGTGTACCGCAGCGATGGCGTGCCGAATGCC CAGCGCGAGATGTACACCGTGCTGCCCGAAATGGCACTGCGCCCGGCAGACGCCTACAACCGCCTGGTCAAGGGGTGCGT CGAAAGCGTCGATATCGACGAATTGATCGGCCGGACACTCGCAGTCATGATTGTACCCTATCCTCCGGGGATCCCGCTCA TCATGCCTGGCGAGCGGATCACTGCAGCCACAAGATCGATCCAGGACTATCTCGTCTACGCCCGGAGCTTCGACAGGAAA TTCCCGGGATTTGAGACGGACATCCACGGACTCCGTTTCGTCGCTAACCCGAGTGGACGGAGATATCTCGTGGATTGCAT CGTCGAGGAGGGACAAGATGATACCGCGTGA Protein sequence : MEFYKAFPIAVIDEDYEGKSAAGRGMRSLAEAIEKEGYRVVAGLSYEDARRLVNVFNTESCWLISVDRTESSTTRWEILA ELLAAKRSRNNLLPIFLFGDDTTAEMVPAPVLRHANAFMRLFEDSPEFMARAIVRAAQNYLERLPPPMFKALMEYTLHGA YSWHTPGHGGGVAFRKSPVGQLFYTFFGENTLRSDISVSVGSVGSLLDHVGPIGEGERNAARIFGADETLFVVGGTSTAN KIVWQGMVTRNDLVLCDRNCHKSILHSLIMTGATPIYLTPSRNGLGIIGPIAKEQFTPEAIAHKIAASPFASETNGKVRL MVVTNSTYDGLCYNVDGIKSALGDAVEVLHFDEAWFAYANFHEFYDGYHAISSTKPARSQEAITFATQSTHKLLAAFSQA SMLHVQHAVAKQLDITRFNEAFMMHTSTSPQYGIIASCDVAAAMMEQPAGRALVQETIDEAMSFRRAVNAVRTQMQDSWW FEVWEPPIADRAPSDATSDWLLKPGDAWHGFEDLAENHVMVDPIKVTILSPGLNAGGAMLEHGIPAAVVTKFLSSRRIEI EKTGLYSFLVLFSMGITRGKWSTLITELLNFKDLYDANAPLSRALPALAAAHPDVYRAMGLRDLCEKIHDVYRSDGVPNA QREMYTVLPEMALRPADAYNRLVKGCVESVDIDELIGRTLAVMIVPYPPGIPLIMPGERITAATRSIQDYLVYARSFDRK FPGFETDIHGLRFVANPSGRRYLVDCIVEEGQDDTA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | CAD66195.1 | putative cadaverin decarboxylase | Virulence | PAI III 536 | Protein | 1e-118 | 44 |
| cadA | NP_756988.1 | lysine decarboxylase, inducible | Not tested | PAI II CFT073 | Protein | 8e-121 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SinmeB_5818 | YP_005717782.1 | lysine decarboxylase | VFG1670 | Protein | 8e-119 | 44 |
