Gene Information

Name : SinmeB_5343 (SinmeB_5343)
Accession : YP_005717360.1
Strain :
Genome accession: NC_017324
Putative virulence/resistance : Unknown
Product : potassium-transporting ATPase subunit A
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.12
Position : 267320 - 269029 bp
Length : 1710 bp
Strand : -
Note : TIGRFAM: ATPase, K+ transporting, A subunit; KEGG: smd:Smed_5358 potassium-transporting ATPase subunit A; PFAM: ATPase, K+ transporting, A subunit

DNA sequence :
ATGTCTGTCATCGGATGGCTGCAGATCAGCCTCCTTTTTCTCGCCGTCCTCGTCGTCGTTAAGCCGCTGGGGCTTTACAT
GGCTGCGGTTCTTTCCGGCGAACCCAATGTCCTTTCGCCGGTTCTCGGACCGGTGGAGCGTGGTCTTTATGGTGCCGCCG
GCATCGATCCGGCACGGGAGCAGGGCTGGCTCGCCTACACGCTCTCCATGCTCGCTTTCAGCATTGCGGGCTTTGCGCTG
CTCTACACGTTCCTGAGACTTCAGACATGGTTGCCCTTGAACCCGCAGGGCTTCGGCAACGTGCCACCGGACCTCGCCTT
CAACACCGCCGTCAGTTTCGTCACCAACACCAATTGGCAGAATTACGGCGGGGAGACGACGCTCAGTCACTTCAGCCAAA
TGATGGGGCTGACAGTGCAGAACTTCGTTTCGGCCGCCACCGGCATTTCGATCGCGCTTGCCGTTACCCGCTCCTTCGCC
CGCTCAGCCGTGCCGACGATCGGCAACTTCTGGGTCGATCTCACCCGTTCGACACTCTACGTCCTCCTGCCGCTTGCCGT
GCTGGTGGCGGTCGCCTTCGTGGCGATGGGCCTGCCGCAGACGTTCCGCGCCTCGGTGGAGGCCACGACCCTCGAGGGGG
TGAAGCAGACCATCGCTCTGGGCCCGGTTGCCAGCCAGGAAGCGATAAAGCAGCTCGGCACCAACGGGGGCGGCTTCTTC
AACGTGAATGCCGCACATCCGTTCGAAAATCCGACTGCGCTTTCCAATTATCTCAATATCTTCGCGATGCTGTCGGTCTC
GGCGGCGCTGCTCTACACATTCGGGCAACTCGTCGGCAACCGGCGGCAGGGCTGGGCCTTCATCGCCGTCACCTATGCAT
TTCTGATCGTCGGTGTCGGGATCGTCTATTGGGCCGAGGCGCAGGGAAATCCGATTCTGTCGCAGCTTGGTCTCGACCCG
GCTCTCGGCAACATGGAAGGCAAGGAAGTCCGTTTCGGCCAGGCGATGACCGCGCTTTACGCGACGGTTACGACCGGCCT
TTCGGATGGCGGGGTCAACGGCATGCACGGCTCGTTCACCGGCCTCGGCGGTCTGGTTCCGATGTTCCTCATGCAGCTCG
GCGAGGTCCTGCCCGGCGGCGTCGGCTCGGGCCTCTACGGCATGGTTGTCTTCGCGATCCTCGCGGTTTTCGTCGCTGGT
CTTATGGTCGGCCGCACTCCGGAGCTGCTCGGCAAGAAGATCGAAGCGCGCGAGATGAAATACGCGATGCTTGCCGTGCT
CATCTTGCCGCTTTCGATCCTCGGCTTCACGGCGATTTCGGCCGTGACGCCCTCGGCCGTGGCCAGCGTCGGTACGGCCG
GACCGCACGGGCTCGCGGAAATCCTCTATGCCTATACGTCGGCCGGCGGCAACAACGGCTCGGCCTTCGGCGGGCTTTCG
GGCAACACGCTCTGGTACAATACGACGCTTGGCTTTGCGATGCTGCTCGGCCGCTTCGGCTATGCCGTGCCGGTGCTTGC
CATTGCCGGCTCGATCGCCGCCAAGACCCGCGCCTCGACATCCAAGGGTACGTTCCCGACCGATACGCCGCTCTTCGCCG
GTCTCCTGATCGGCATCATTCTCATTCTTGGCGGGCTGCAGTTCTTGCCGGCGCTCGCGCTTGGTCCGATCGTCGAGCAT
TTCGCCATGCTCTCCGGCCAGACTTTCTGA

Protein sequence :
MSVIGWLQISLLFLAVLVVVKPLGLYMAAVLSGEPNVLSPVLGPVERGLYGAAGIDPAREQGWLAYTLSMLAFSIAGFAL
LYTFLRLQTWLPLNPQGFGNVPPDLAFNTAVSFVTNTNWQNYGGETTLSHFSQMMGLTVQNFVSAATGISIALAVTRSFA
RSAVPTIGNFWVDLTRSTLYVLLPLAVLVAVAFVAMGLPQTFRASVEATTLEGVKQTIALGPVASQEAIKQLGTNGGGFF
NVNAAHPFENPTALSNYLNIFAMLSVSAALLYTFGQLVGNRRQGWAFIAVTYAFLIVGVGIVYWAEAQGNPILSQLGLDP
ALGNMEGKEVRFGQAMTALYATVTTGLSDGGVNGMHGSFTGLGGLVPMFLMQLGEVLPGGVGSGLYGMVVFAILAVFVAG
LMVGRTPELLGKKIEAREMKYAMLAVLILPLSILGFTAISAVTPSAVASVGTAGPHGLAEILYAYTSAGGNNGSAFGGLS
GNTLWYNTTLGFAMLLGRFGYAVPVLAIAGSIAAKTRASTSKGTFPTDTPLFAGLLIGIILILGGLQFLPALALGPIVEH
FAMLSGQTF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kdpA NP_814333.1 potassium-transporting ATPase subunit A Not tested Not named Protein 3e-77 48
ef0087 AAM75290.1 EF0087 Not tested Not named Protein 3e-77 48
kdpA NP_373308.2 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-67 41
kdpA YP_190030.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-67 41
unnamed BAB43902.1 potassium-transporting ATPase(A chain) Not tested Type-II SCCmec Protein 2e-67 41
kdpA YP_251948.1 potassium-transporting ATPase subunit A Not tested SCCmec Protein 4e-67 41
SAR0070 YP_039538.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-67 41
truncated-kdpA NP_370596.1 potassium-transporting ATPase subunit A Not tested Type-II SCCmec Protein 3e-67 41