Gene Information

Name : SinmeB_5238 (SinmeB_5238)
Accession : YP_005717277.1
Strain :
Genome accession: NC_017324
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 162190 - 162456 bp
Length : 267 bp
Strand : +
Note : PFAM: Transposase IS3/IS911family; KEGG: ara:Arad_9823 insertion sequence transposase protein

DNA sequence :
ATGAAGGCATCGCAGTTTTCGGACGCCCAGAAGGCGTTCATCCTGAAGCAGGGTGATGAAGGTGTGCCAGTCGCTGAGAT
CTGCCGGAAGGCGGGGATCAGCCAGGCGACGTATTTCAACTGGAAGAAAAAGTATGCCGGCATGTTGCCGCCGGAGATGA
AGAAGCTGAAGCAGCTCGAGGACGAGAATGCGCGGCTGAAGAAGATCGTCGCGGACCTGACGTTGGACCGCGAAATGCTG
CAGGAGGTTATTCGCCGAAAGCTTTAA

Protein sequence :
MKASQFSDAQKAFILKQGDEGVPVAEICRKAGISQATYFNWKKKYAGMLPPEMKKLKQLEDENARLKKIVADLTLDREML
QEVIRRKL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnp AAL78293.1 putative truncated transposase Not tested Hrp PAI Protein 4e-22 54
XCV0438 YP_362169.1 ISRSO12 transposase (fragment) Not tested Hrp PAI Protein 5e-22 54
EXA9 ABD94680.1 IS407 transposase OrfA Not tested ExoU island A Protein 3e-16 47
trp1400A CAB46581.1 IS1400 transposase A Not tested HPI Protein 5e-18 47
unnamed AAK01522.1 transposase A Not tested PAGI-1 Protein 2e-15 46
unnamed ABR13351.1 insertion sequence IS407 OrfA Not tested PAGI-5 Protein 8e-16 46
unnamed ABR13539.1 insertion sequence IS407 OrfA Not tested PAGI-8 Protein 8e-16 46