Gene Information

Name : SinmeB_6660 (SinmeB_6660)
Accession : YP_005718507.1
Strain :
Genome accession: NC_017324
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 1562355 - 1563197 bp
Length : 843 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: ske:Sked_19110 cobalamin/Fe3+-siderophore ABC transporter ATPase; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACCGACCATCTGCTCGTCGCCAGCGGATTGACGGCCGGTTATGACAAGACCGAAATCCTGCATGCGCTCGACCTCAC
CATTCCCCCGCGCAAAATCACGGTGATCGTCGGCGCCAACGCCTGTGGCAAGTCCACGTTTCTCCGCACGCTCTCGCGGT
TAATCGCGCCCAGCAAGGGGCAAGTTCTCCTCGACGGCAAATCCATCCACCGGACACCCTCGCGAGATCTCGCCCGGACG
CTGGGTCTGTTGCCGCAATCGCCGATCGCGCCGGAAGGCATCACAGTGGTCGACCTCGTCAGCAGGGGACGGCATCCGCA
TCAAAGCCTGTTTTCCGGCTGGACGCGACGGGACGACGAGGCGGTCGACAGTGCGCTTAGGGCGACAAAGACATTCGACC
TTGCCGATCGGCCGATCGACGAGCTCTCCGGCGGCCAGCGGCAGCGGGTCTGGATCGCCATGGCACTCGCCCAGCAAACC
GACATCCTGCTGCTCGACGAGCCGACGACCTTTCTCGACATCAACCATCAGATCGAGGTGCTCGATCTCCTGACCGATCT
CAACAGCGCGCGTCGAACTACGGTCGTCATGGTGCTGCACGATCTCAACCTTGCTGCCCGCTACGCCGACCATCTCGTGG
CGATTGCCGGTGGGCGCGTGCACATTTCGGGCACTCCGGAAGAGGTGCTCACCGAAGAGACCGTGCGGCATGTTTTCGGC
CTTGATAGTCGCGTCATCAGCGATCCCACGTCGGGTCGGCCAATCATGCTACCGATCGGGCGACACCGGATGGCCGTCAT
CGACGACATGGGCGATGCACCACAAAAGGAGAGGAGCGCATGA

Protein sequence : 
MTDHLLVASGLTAGYDKTEILHALDLTIPPRKITVIVGANACGKSTFLRTLSRLIAPSKGQVLLDGKSIHRTPSRDLART
LGLLPQSPIAPEGITVVDLVSRGRHPHQSLFSGWTRRDDEAVDSALRATKTFDLADRPIDELSGGQRQRVWIAMALAQQT
DILLLDEPTTFLDINHQIEVLDLLTDLNSARRTTVVMVLHDLNLAARYADHLVAIAGGRVHISGTPEEVLTEETVRHVFG
LDSRVISDPTSGRPIMLPIGRHRMAVIDDMGDAPQKERSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SPN23F_09560 YP_002510939.1 ferric siderophore ABC transporter ATP-binding protein Virulence PPI-1 Protein 7e-70 54
SP_1035 NP_345510.1 iron-compound ABC transporter ATP-binding protein Not tested PPI-1 Protein 7e-70 54
iusE YP_005143742.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 1e-65 54
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 1e-53 49
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-52 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-52 45
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-52 45
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-52 45
DIP0585 NP_938961.1 iron ABC transporter ATP-binding protein Virulence Not named Protein 2e-49 42
ciuD YP_005681255.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_005683346.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_003783391.1 iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41
ciuD YP_005685432.1 Iron ABC transporter ATP-binding protein Virulence PiCp 4 Protein 1e-50 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_6660 YP_005718507.1 iron-chelate-transporting ATPase BAC0164 Protein 6e-54 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_6660 YP_005718507.1 iron-chelate-transporting ATPase VFG0925 Protein 3e-66 51
SinmeB_6660 YP_005718507.1 iron-chelate-transporting ATPase VFG1042 Protein 6e-54 49