Gene Information

Name : SinmeB_6218 (SinmeB_6218)
Accession : YP_005718103.1
Strain :
Genome accession: NC_017324
Putative virulence/resistance : Virulence
Product : VirB8 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1127469 - 1128140 bp
Length : 672 bp
Strand : -
Note : PFAM: VirB8; KEGG: rec:RHECIAT_PC0000903 transport secretion system IV protein, VirB8

DNA sequence :
ATGGTCTCGGCGGACGAACTCAAGACATACTTCGAAAAGGCGCGACGCTTCGATCAGGACCGCGTGATCCAGGTCGAGCG
CTCGGCACGCATCGCCTGGTCTGTTGCGATCGTAGCCGGCATTCTTGCGGGCGCTTCGATCTTCGCCGTCGCCGCCCTCA
CGCCGCTGAAAACGATCGAGCCATTTGTCGTGCGCGTCGACAATTCGACGGGCATTGTCGATGTCGTGTCAGCGCTGACG
TCGACGGCCGGCACTTACGACGAGGCCGTGACCAAATACTTCGCCGCGAAATACGTGCGTGCGCGGGAAGGCTATGTCTG
GAGTGAGGCGGAGGAGAACTTCCGCACCGTCGCCTTGCTGTCGACGCAGCCGGAGCAAGCTCGTTTTTCGGCCATCTATC
GCGGCAGCAATCCAGACTCGCCGCAGAATACCTACGGGCGCAGCGCCACAGCGCGCATCAGCATCGCGTCGATCTCGCTA
ATCAATCCGAATGTCGTGTCCGTCCGTTACATGCGCACGATTACCCGCGGCGAGGAGGTTCGACCCACCCATTGGGTTGC
GACGCTCACCTTCTCTTATGTGAACTCGCCGATGTCATCGACGGATCGGCTGGTGAATCCTCTTGGTTTTGCGGTTAGTG
AATACCGGGCCGATCCGGAGGCCATCAACTGA

Protein sequence :
MVSADELKTYFEKARRFDQDRVIQVERSARIAWSVAIVAGILAGASIFAVAALTPLKTIEPFVVRVDNSTGIVDVVSALT
STAGTYDEAVTKYFAAKYVRAREGYVWSEAEENFRTVALLSTQPEQARFSAIYRGSNPDSPQNTYGRSATARISIASISL
INPNVVSVRYMRTITRGEEVRPTHWVATLTFSYVNSPMSSTDRLVNPLGFAVSEYRADPEAIN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
virB8 YP_001610004.1 VirB8 protein Virulence Not named Protein 2e-44 52
vblB8 YP_001610348.1 VblB8 protein Virulence Not named Protein 2e-47 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_6218 YP_005718103.1 VirB8 family protein VFG2237 Protein 3e-46 52