Gene Information

Name : SinmeB_5061 (SinmeB_5061)
Accession : YP_005717136.1
Strain :
Genome accession: NC_017324
Putative virulence/resistance : Unknown
Product : succinate-semialdehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.24
Position : 10154 - 11608 bp
Length : 1455 bp
Strand : +
Note : TIGRFAM: Succinic semialdehyde dehydrogenase; KEGG: smd:Smed_5600 succinic semialdehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain

DNA sequence :
ATGAGATTGAAGGACAAGGAACTCTTCCGGCAATTGGGCCTGATCGGCGGTGAGTGGATCGCCGGAGCTTCGGGCGAGGT
CGTCGACGTCATCGATCCTGCGAACCAGGCCGTTCTCGGCACCGTGCCCGACATGGGAACGGCCGAAACCCGCGCGGCCA
TCGAAGCGGCCAATGCCGCCTTCGGACCTTGGAAGAAGAAAACCCACGCCGAACGCGCCGCCGTGCTCGAGCGCTGGCAC
GCGCTGATGATCGAAAACCTCGAAGATCTGGCGGTGCTCGTGACGATGGAACAGGGCAAGCCGCTCGAGGAGGCGCGTGG
CGAGATCCGCTACGGCGCCGCCTTTGTCAAATGGTTCGCGGAAGAATCCCGCCGCATCGGCGGCCACACCATTCCCTCCC
CGACGTCGGACCGCCGCATCGTCGTGCTGAAGGAAGCGGTCGGCGTCTGCGCCATCGTCACGCCGTGGAATTTCCCCAAC
GCGATGATCACCCGGAAGGTCGCCCCGGCGCTCGCCGCCGGCTGCACGGTGGTCATCAAGCCCTCGGAGTTCACGCCCTT
CTCGGCGCTCGCCCTCGGCGTGCTCGCCGAGCGCGCCGGCATTCCGGCCGGCGTCGTCAATATCGTCACGGGCATGCCGA
CGGCGATCGGTAACGAGTTCATGACGAACGAGACGGTACGCAAGATCTCCTTCACCGGCTCGACCCGCGTCGGTTCGCTG
CTGATGCGCGGCGCTGCAGACAGCGTCAAGCGGCTCTCGCTCGAACTCGGCGGCAATGCCCCCTTCATCGTTTTCGACGA
CGCCAATCTCGATCTTGCGGTGGAAGGCGCGATCGCGTCGAAGTTCCGCAATGGCGGGCAGACCTGCGTCTGCGCCAACC
GAATTCTCGTGCAGGCCGGCGTCTATGACGCCTTCGCCGAGAAGCTCGGCGCCCGCGTCAACGCGATGAAGGTAGGCCCG
GGGACGGAGCCCGGCATCGCAATTGGCCCGATGATCAATGAGGCTGCGATCGACAAGATCGACCGCCACGTCGAAGACGC
GATTGCCAAGGGCGCAAAGCTGGCGGCGCGTGGCAGGTCGGTGCCGGGGGGCCGGCAATATACGGCCCCGATTGTGCTCA
CCGGCGCCACCACGGACATGCTGCTCGCCAGCGAGGAAACCTTCGGTCCCGTTGCCCCGCTCTTCCGCTTCGAGACCGAA
GACGAGGCGATCGCCATCGCCAACGGCACGCCCTTTGGGCTGGCCGCTTATTTCTACACCGAAGGCCTGAAGCGCTCCTG
GCGGGTGGCGGAAGCACTGGAGTTTGGCATGATCGGCCTTAACACCGGCGCCATCTCGACCGAAGTCGCGCCCTTCGGCG
GCGTCAAGCAATCCGGCCTCGGACGCGAGGGCGCCCAGGTCGGCATCGAAGAATATCTCGAGATGAAGAGCTTCCACATC
GGGGGGCTGGACTAG

Protein sequence :
MRLKDKELFRQLGLIGGEWIAGASGEVVDVIDPANQAVLGTVPDMGTAETRAAIEAANAAFGPWKKKTHAERAAVLERWH
ALMIENLEDLAVLVTMEQGKPLEEARGEIRYGAAFVKWFAEESRRIGGHTIPSPTSDRRIVVLKEAVGVCAIVTPWNFPN
AMITRKVAPALAAGCTVVIKPSEFTPFSALALGVLAERAGIPAGVVNIVTGMPTAIGNEFMTNETVRKISFTGSTRVGSL
LMRGAADSVKRLSLELGGNAPFIVFDDANLDLAVEGAIASKFRNGGQTCVCANRILVQAGVYDAFAEKLGARVNAMKVGP
GTEPGIAIGPMINEAAIDKIDRHVEDAIAKGAKLAARGRSVPGGRQYTAPIVLTGATTDMLLASEETFGPVAPLFRFETE
DEAIAIANGTPFGLAAYFYTEGLKRSWRVAEALEFGMIGLNTGAISTEVAPFGGVKQSGLGREGAQVGIEEYLEMKSFHI
GGLD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orf17 AAO17183.1 Orf17 Not tested tcd island Protein 5e-129 57
cur_1509 YP_001800903.1 NAD-dependent aldehyde dehydrogenase Not tested Not named Protein 9e-80 41