Gene Information

Name : SinmeB_4091 (SinmeB_4091)
Accession : YP_005716204.1
Strain :
Genome accession: NC_017323
Putative virulence/resistance : Unknown
Product : transposase IS66
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 693561 - 695126 bp
Length : 1566 bp
Strand : -
Note : KEGG: smd:Smed_6513 transposase IS66; manually curated; PFAM: Transposase, IS66

DNA sequence :
ATGGAAACAACGCCGCTGCACACTCAGGACGAGCTATCTGCTTTGCGCGCGCTCGTCGCTGAACAGGCGGCGAAACTCAG
CGCGCAAGAAGCCGAAGTCAGCAAGCGCGACTCCATTATCGGTCTTCTGCGCGCGCAGTTGGAACTGCTGCGCCATCGAC
AACATGGCCCTTCTTCGGAAAAGATAGACCGCAAAATCGAGCAATTCGAGCTGATGCTGGAGGAGATCGAGGCTTCTCGC
GCTGAGGCCGATGCGCGCTCTGCGAACTCCCCCTTGCCGGAGTTAGACGACGAACCGGACAAGCCGAAGCGCAGACCGCT
GCCGGATGGCCTTCCAACTGAGGAGCTGGTCTACGCGGCACCCTGCAATTGTCCGACTTGTGGTGGCACATCTTTCCTGA
AGGCGGCTGACAAGGTGGTCCAGGTGATGGAGCACGTACCGGCGTCCGTAAAGATTGTCCGCCATATCGAAAAGCGCATG
GTCTGCAAGGACTGCGATACGACGGTGTCTGGCGAAATGCCGACCTTGCCGATCGGGCGAGGCAAGCCCGGTCCGGGGTT
GCTCGCGCATATCATGGTCGCCAAGTTCGACGATCACATCCCGCTCTACCGTCTCTCCGAGATGTACGACCGCCTGGGGA
TAGACATCTCCCGGTCTGTCATGGCGGACTGGGTTGGCCGTGTGTCCGTTCTGCTTTCGCCCCTCATCTTGCTGATCAGA
GCCCATATCGCCGCGGTCGACCGAATACACACGGACGATACCCCGGTTGATGTTCTCGACCCTGGACGGGGCAAAACGAA
AACCGGCAGAGTCTGGGTCTATGTCTTCGATGGCAGCGGGTATCAAGATCCCACTCCCAGAGCTGTCGCCTATTACTATA
GCCCCGACCGCAAGGGCGCGCATCCGGCAGACCACCTCGCTGACTTCAGCGGCGTGATGCATGCCGATGGCTACGGTGGC
TATAAGAAGCTTTACGGCAACCAGATCGTTGAGGCCGCGTGCATGGCGCACGTGCGCCGCAAGTTCCATGACGTAATCAA
GCTGAAGCCATCACCGATAGCCGAGGAGGCGCTGTCTCGCATCGGCGCGCTCTACGATATCGAGGATCGGATCCGCGGCA
TGCCGGCCGCCGAGCGCCAAATGCTGCGACAAGAGCACGCTGGTCCCATTCTGAGAGACCTGAAGTTCTGGATCGAGGAA
ACGCTTCCGACTTTGCCGCAGAAACAGAAGTTGGCCGAGGCGATGCGATATGCCCTCTCGCGGTGGGCGGCATTGAGCGT
TTACATCGACGATGGGCGCGTCGAGATCGACAACAATATAGCTGAACGAGCCATGCGCCCGCTTGGAATTGGTCGAAAGA
ACTGGCTCTTCGCCGGCTCCGACAAGGGCGGCGAGCGCATCGCGGATATCCTGACTATCATCGAGACGGCCAAACAACAT
GGCCTCAATCCGGAGGTCTATCTGACAGACGTCCTAACCCGGATCCAAGATCATCCCACGGATCGCCTTGAGGAACTGCT
GCCGTGGCAGTGGGCGCCGGCAAAAGACCTGCACGAGGCTGCCTGA

Protein sequence :
METTPLHTQDELSALRALVAEQAAKLSAQEAEVSKRDSIIGLLRAQLELLRHRQHGPSSEKIDRKIEQFELMLEEIEASR
AEADARSANSPLPELDDEPDKPKRRPLPDGLPTEELVYAAPCNCPTCGGTSFLKAADKVVQVMEHVPASVKIVRHIEKRM
VCKDCDTTVSGEMPTLPIGRGKPGPGLLAHIMVAKFDDHIPLYRLSEMYDRLGIDISRSVMADWVGRVSVLLSPLILLIR
AHIAAVDRIHTDDTPVDVLDPGRGKTKTGRVWVYVFDGSGYQDPTPRAVAYYYSPDRKGAHPADHLADFSGVMHADGYGG
YKKLYGNQIVEAACMAHVRRKFHDVIKLKPSPIAEEALSRIGALYDIEDRIRGMPAAERQMLRQEHAGPILRDLKFWIEE
TLPTLPQKQKLAEAMRYALSRWAALSVYIDDGRVEIDNNIAERAMRPLGIGRKNWLFAGSDKGGERIADILTIIETAKQH
GLNPEVYLTDVLTRIQDHPTDRLEELLPWQWAPAKDLHEAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 4e-81 49
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 1e-89 48
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 4e-102 47
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-83 46
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 5e-95 44
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 5e-95 44
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 9e-96 44
unnamed AAC31494.1 L0015 Not tested LEE Protein 6e-96 44
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 9e-96 44
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 6e-96 44
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 3e-96 44
tnp AEA34686.1 transposase Not tested Not named Protein 5e-96 44
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 3e-96 44
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 3e-95 44
unnamed AAL57570.1 unknown Not tested LEE Protein 1e-95 44
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-85 44
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 5e-87 42
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 5e-87 42
unnamed AAL08460.1 unknown Not tested SRL Protein 5e-68 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_4091 YP_005716204.1 transposase IS66 VFG1700 Protein 2e-81 49
SinmeB_4091 YP_005716204.1 transposase IS66 VFG0793 Protein 4e-96 44
SinmeB_4091 YP_005716204.1 transposase IS66 VFG1051 Protein 3e-68 42
SinmeB_4091 YP_005716204.1 transposase IS66 VFG1736 Protein 2e-69 41