|
Name : SinmeB_3801 (SinmeB_3801) Accession : YP_005715930.1 Strain : Genome accession: NC_017323 Putative virulence/resistance : Unknown Product : Nickel-transporting ATPase Function : - COG functional category : - COG ID : - EC number : 3.6.3.30 Position : 369333 - 370934 bp Length : 1602 bp Strand : - Note : PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: smd:Smed_4688 ABC transporter related; SMART: ATPase, AAA+ type, core DNA sequence : ATGACAGAGATGAAGGACTCCATTCTCGCTGTACGTGGCCTGAAGGTCGACTTTTCCACCCCCGACGGCACCGTCGAAGC GGTCAAGGGCATCGATCTCGACGTCCGTTCCGGCGAGACGCTCGCGGTCGTCGGCGAATCCGGCTCGGGCAAGAGCCAGA CCATGATGGGAATCATGGGCCTGCTCGCCAAGAACGGGACGGTGACCGGTTCGGCGCGCTATCGCGGCCAGGAACTCGTA GGGCTCGCACCGAAGGCCCTGAACAAGGTGCGCGGCTCGAAGATCACCATGATCTTCCAGGAGCCGATGACCTCGCTCGA TCCGCTCTACACCATCGGCCGTCAGATCGCCGAGCCGATCGTCCATCACCGCGGCGGCAGCTTCAAGGAGGCGCGCGGGC GCGTCCTCGAGCTCCTGGAGCTCGTCGGCATTCCCGAGCCGGGGCGGCGCATCGACAGCTATCCGCACGAGCTTTCCGGC GGCCAGCGCCAGCGTGTCATGATCGCCATGGCGCTTGCCAACGAGCCGGATATCCTGATCGCCGACGAGCCGACGACCGC CCTTGACGTGACCATCCAGGCCCAGATCCTCGATCTGCTCAAATCGCTGCAAAGGCGCTTCGGCATGGCGATCGTGCTGA TCACCCACGACCTCGGCATCGTCAAGTACTTCGCCGACCGTGTCGCGGTCATGCGCCGGGGCGAGGTCGTGGAGCAGGGG ATGACGGCTGATATCTTCGAGCGGCCGAAGGGGGACTATACCAGGATGCTGCTGGAGGCCGAACCGAGCGGGCGCAAGGC TTCGCCCCCCGACAACGCCCCGATCATCCTGGAGGGTCGCAATGTCGCGGTGGACTATACGATCCCAGGCGGCCTCTTCC GCGGGGCCTCGGCCGCTTTCCGTGCCGTCGACGGCGTCAATCTTAGGCTCAGGCAGGGTCAGACGATCGGCATCGTCGGC GAATCCGGCTCCGGGAAATCGACGCTCGGCAGGGCGCTTCTGAGGCTTCTGCCGAGCAGCGGTTACTACCGTTTCGGCTC GACCGACATTTCCGGCTTTGACCGCGGCGCGATGCGGCCGCTGCGCCGCCAGCTGCAGCTCGTCTTTCAGGACCCCTACG GGTCGCTCTCGCCGCGCCGGACCGTGGGGGAGATCATCACCGAAGGCCTCCATGTGCATGAGCCCGACCTGAGCCGTGCC GATCGCGACCGCAGGGCCATCGCCGCGTTGAAGGAAGTCGGCCTCGATCCCGCGTCGCGCAACCGCTATCCGCATGAATT CTCCGGCGGACAGCGCCAGCGCATCGCAATCGCCCGCGCGATCATCCTGAAGCCGAAGGTCGTCATTCTCGACGAGCCGA CTTCGGCCCTCGACCGGTCGGTGCAGGGGCAGGTGATCGAACTCCTACGCGATCTGCAGGAAAAGCACGGTCTCTCCTAC ATCTTCATCAGCCACGATCTTTCGGTGGTGAAGGCGATGTCTGACTATGTGATCGTGATGAAGAACGGCCGGATCGTCGA AGAGGGAGAAACGGACGCGATCTTCGATGCGCCGAGGGAGCCCTATACGAAGACGCTGATCGGCGCGGCGTTCAACGTGT GA Protein sequence : MTEMKDSILAVRGLKVDFSTPDGTVEAVKGIDLDVRSGETLAVVGESGSGKSQTMMGIMGLLAKNGTVTGSARYRGQELV GLAPKALNKVRGSKITMIFQEPMTSLDPLYTIGRQIAEPIVHHRGGSFKEARGRVLELLELVGIPEPGRRIDSYPHELSG GQRQRVMIAMALANEPDILIADEPTTALDVTIQAQILDLLKSLQRRFGMAIVLITHDLGIVKYFADRVAVMRRGEVVEQG MTADIFERPKGDYTRMLLEAEPSGRKASPPDNAPIILEGRNVAVDYTIPGGLFRGASAAFRAVDGVNLRLRQGQTIGIVG ESGSGKSTLGRALLRLLPSSGYYRFGSTDISGFDRGAMRPLRRQLQLVFQDPYGSLSPRRTVGEIITEGLHVHEPDLSRA DRDRRAIAALKEVGLDPASRNRYPHEFSGGQRQRIAIARAIILKPKVVILDEPTSALDRSVQGQVIELLRDLQEKHGLSY IFISHDLSVVKAMSDYVIVMKNGRIVEEGETDAIFDAPREPYTKTLIGAAFNV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| dppD | YP_005160017.1 | putative peptide ABC transport system ATP-binding protein | Not tested | Not named | Protein | 5e-96 | 44 |
| oppDF2 | YP_005681814.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-76 | 43 |
| oppDF2 | YP_005683914.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-76 | 43 |
| cpfrc_01561 | YP_003783961.1 | hypothetical protein | Not tested | PiCp 6 | Protein | 3e-76 | 43 |
| oppDF2 | YP_005686002.1 | Oligopeptide transport ATP-binding protein OppD | Not tested | PiCp 6 | Protein | 3e-76 | 43 |
