Gene Information

Name : SinmeB_4677 (SinmeB_4677)
Accession : YP_005716773.1
Strain :
Genome accession: NC_017323
Putative virulence/resistance : Unknown
Product : Nickel-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.30
Position : 1310454 - 1312124 bp
Length : 1671 bp
Strand : +
Note : PFAM: ABC transporter-like; Oligopeptide/dipeptide ABC transporter, C-terminal; KEGG: smd:Smed_4143 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence :
ATGGTAACGATCGAAAGCATTGTCCCGGCACCCGAGGAACGGCGCGACCGCGATATGAAGGATGCGAGGCCGGTGATCGA
TGCCCGAAAGGTGGCGGTATCCTTCAAGGTCGAGAACGGCACGGTCCAGGCGGTGAAGGATGTTTCCTTCCAGCTTTACC
GCGGCGAGACGGTGGCGATCGTTGGCGAATCCGGCTCCGGCAAGTCGGTGACCGCGCGCACCGTCATGGGGCTTCTGTCG
AAGCGCGCTACGATCGCGCCGCAGGCGCGCATCGAATATGACGGCAGGGACGTGTTGAAATTCTCGAAGAGAGAGCGCCG
GGCGCTGCGCGGCGATCGCATCTCGATGATCTTCCAGGAGCCGATGAGCTCGCTGAACCCGGTCTACACGATCGGCAGCC
AGATCATCGAGGCGATCCGGGCGCATCGCCGCGTCAGCCGGCGCGCCGCCGCCGAGCGGGCGCTGGAGCTCTTGCGTCAT
GTCCAGATCCCCGACCCGGAAGCACGCCTTAACCAGTATCCGCATCAGCTTTCCGGCGGCCAGCGCCAGCGCGTGATGAT
CGCAATGGCGCTTGCCAACGATCCGGACGTGCTGATTGCCGACGAGCCGACGACGGCGCTCGACGTAACGGTGCAGGCGC
AGATACTCAACCTCATCCGCAAGCTGCAGCAGGAGCTCGGCATGGCGGTGATCCTGATCACGCATGACCTGACGGTGGTC
CGCCAATTCTCCGATTACGTCTATGTCATGCAGCTCGGCGAAGTGAAGGAACACAACACGACCGAGGCGCTCTTTGCCGA
TCCGCAGCACGTCTATACGCGGCGGCTGCTTTCCTCCGAACCCTCCGGTTCGGCCAATCCGCTGCCGGACGACGCGCCGA
TCCTGCTCGACGGCCGCAATGTCCGCGTCTCCTTCACCTTGAAGAAGGGCGGGTTCTTCAGGCCGGAATTCAAGGAACTC
GTCGCGGTCGACGGGCTCAGCCTCAATCTTCGCCGGCACGAGACGCTCGGCCTCGTCGGCGAGTCCGGTTCCGGCAAGAC
CACTTTCGGCCAGGCGCTGATCCGGCTTCTCAACACCGATGGCGGCGAGATCTATTTCGAAGGCGAGCCGATCCATGACA
AGGACCGCAAGGGCATGCGGCCGCTTCGTTCGAAGATCCAGATCGTCTTTCAGGATCCCTTCTCCTCGCTCAACCCGCGA
ATGTCGGTCGGCCAGATCATAGAGGAGGGTCTGATCGTCAACGGCATCGGCGAAAACCGAAAGGACAGGCTGAAGCGGGT
GGAGGACGCGCTTGTCAGCGCCGGCATGCCGTCGAACATCCTTTCGCGCTTCCCGCACGAATTTTCCGGTGGCCAGCGCC
AGCGCATCGCGATCGCCCGCGCCGTCGCGCTGGAACCGGAATTCATCCTGCTCGACGAGCCGACCTCGGCGCTCGACCTC
TCGGTGCAGGCGCAGATCATCGAACTCCTGCGCCGGCTGCAGGACGAGCGCGGCCTGAGCTATCTCTTCATCTCCCACGA
CCTGAAAGTCGTGCGCGCGCTCTGCCACCGCGTGGTCGTCATGCAGGACGGCAAGATCGTCGAAGAGGGGCCGGTGAGCG
AAATCCTCAACAATCCCAAGACTGCCTACACGGAGCGGCTGGTAAAGGCCGCCTTCGAAGTGGCCGCGTGA

Protein sequence :
MVTIESIVPAPEERRDRDMKDARPVIDARKVAVSFKVENGTVQAVKDVSFQLYRGETVAIVGESGSGKSVTARTVMGLLS
KRATIAPQARIEYDGRDVLKFSKRERRALRGDRISMIFQEPMSSLNPVYTIGSQIIEAIRAHRRVSRRAAAERALELLRH
VQIPDPEARLNQYPHQLSGGQRQRVMIAMALANDPDVLIADEPTTALDVTVQAQILNLIRKLQQELGMAVILITHDLTVV
RQFSDYVYVMQLGEVKEHNTTEALFADPQHVYTRRLLSSEPSGSANPLPDDAPILLDGRNVRVSFTLKKGGFFRPEFKEL
VAVDGLSLNLRRHETLGLVGESGSGKTTFGQALIRLLNTDGGEIYFEGEPIHDKDRKGMRPLRSKIQIVFQDPFSSLNPR
MSVGQIIEEGLIVNGIGENRKDRLKRVEDALVSAGMPSNILSRFPHEFSGGQRQRIAIARAVALEPEFILLDEPTSALDL
SVQAQIIELLRRLQDERGLSYLFISHDLKVVRALCHRVVVMQDGKIVEEGPVSEILNNPKTAYTERLVKAAFEVAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dppD YP_005160017.1 putative peptide ABC transport system ATP-binding protein Not tested Not named Protein 8e-96 43
oppDF2 YP_005681814.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-70 42
oppDF2 YP_005683914.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-70 42
cpfrc_01561 YP_003783961.1 hypothetical protein Not tested PiCp 6 Protein 2e-70 42
oppDF2 YP_005686002.1 Oligopeptide transport ATP-binding protein OppD Not tested PiCp 6 Protein 2e-70 42