Gene Information

Name : SinmeB_4606 (SinmeB_4606)
Accession : YP_005716704.1
Strain :
Genome accession: NC_017323
Putative virulence/resistance : Virulence
Product : iron-chelate-transporting ATPase
Function : -
COG functional category : -
COG ID : -
EC number : 3.6.3.34
Position : 1227795 - 1228595 bp
Length : 801 bp
Strand : -
Note : PFAM: ABC transporter-like; KEGG: smd:Smed_4079 ABC transporter related; SMART: ATPase, AAA+ type, core

DNA sequence : 
ATGACGCTTTCGGCGAGCGGGGTTTCATGGTCGGCCGGTGGGGTGGAGATCCTGAAGGATGTCTCCCTCACCGTCGAGAC
GGGAGAGTTCCTCGGCATCATCGGCCCGAACGGTTCCGGCAAGACGAGCCTGATGTCGCTCATATCGGGCATCCGCAAGC
CGAAGAGGGGGAAGGTGCTTCTGGACGGTTGTCCGATCGGGACGCTCGGCCGCCGCACGGTCGCGCAAAGGCTCGCTCTG
GTCGAGCAGCAGGCCGAGACCGGCGAGCGGATCACCGCGCGCCAAGCGGTCGAGCTCGGCCGCACGCCCTATCTCGGGCC
GCTTTCGCCCTGGTCGCCGGAGGACGATGCGATCGTCGGGGCGGCGCTCGCAAATGTGGACATGGCGCATCTTGCCGATC
GCCTCTGGCACACGCTCTCCGGCGGCGAGCGGCAAAGGCTGCACATTGCTCGGGCGCTGGCGCAGCAATCGAAGATCCTG
CTCCTCGACGAGCCGACCAACCATCTCGACATCGGCCATCAGATCAGCCTGCTCGACCTCGTTCGACGCCAGGACCTGAC
GGTGGTCGCAGCGCTCCATGACCTCAACCACGCCGCTATGTTCTGCGACAGGATCGCGGTGATGCAGGCCGGCCGGCTGG
TGGCGCTCGGGCGCCCGCGGGAGGTACTGACGGTCGAGCGCATCCGCGCAGTCTTCGGGATCGAGGTCGAGGTCGAGCAC
GAGTTCGACGGAAGCTGCTCCATCCGCTATCGCGCAAGACGCCCGCGTCCGCTTGCCGCAATCGCCGCCGTCGGAGCCTG
A

Protein sequence : 
MTLSASGVSWSAGGVEILKDVSLTVETGEFLGIIGPNGSGKTSLMSLISGIRKPKRGKVLLDGCPIGTLGRRTVAQRLAL
VEQQAETGERITARQAVELGRTPYLGPLSPWSPEDDAIVGAALANVDMAHLADRLWHTLSGGERQRLHIARALAQQSKIL
LLDEPTNHLDIGHQISLLDLVRRQDLTVVAALHDLNHAAMFCDRIAVMQAGRLVALGRPREVLTVERIRAVFGIEVEVEH
EFDGSCSIRYRARRPRPLAAIAAVGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
CDCE8392_1767 YP_005134301.1 iron complex transport system ATP-binding protein Virulence Not named Protein 7e-38 46
fecE AAL08451.1 ATP-binding protein FecE Virulence SRL Protein 4e-38 45
fagC YP_005682397.1 ATP binding cytoplasmic membrane protein Virulence PiCp 1 Protein 4e-31 41
fagC YP_005684488.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-31 41
fagC YP_005680307.1 ATP binding cytoplasmic membrane protein Not tested PiCp 1 Protein 4e-31 41
fagC YP_003782430.1 ABC transporter ATP-binding protein Not tested PiCp 1 Protein 4e-31 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_4606 YP_005716704.1 iron-chelate-transporting ATPase BAC0164 Protein 2e-38 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_4606 YP_005716704.1 iron-chelate-transporting ATPase VFG1042 Protein 2e-38 45
SinmeB_4606 YP_005716704.1 iron-chelate-transporting ATPase VFG0925 Protein 4e-34 41