Gene Information

Name : SinmeB_3069 (SinmeB_3069)
Accession : YP_005715209.1
Strain : Sinorhizobium meliloti BL225C
Genome accession: NC_017322
Putative virulence/resistance : Virulence
Product : Betaine-aldehyde dehydrogenase
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.8
Position : 3222742 - 3224250 bp
Length : 1509 bp
Strand : -
Note : KEGG: smd:Smed_3171 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain

DNA sequence :
ATGACGGTGGTGGTGAGGCCGAAGGCGCTCGGCGACTACGATACCCGCGAATTCCGGATGCTGATCGACGGTCAGTGGGT
GGATGGCGCCGAGGGCCGCACGATCGAGCGGGTGGCGCCGGGTCACGGCGTCGTCGTCAGCCGCTATCAGGCGGCGGCGA
AAGCGGATGCCGAACGGGCGATCGCCGCCGCACGGCGCGCTTTCGACGAAGGTCCATGGCCGCGCATGACCGCCTCGGAA
CGGTCGTTGATCCTGCTCAGGGCCGCCGACATGATTGCCGCGCGAGCGGATGAGCTCGCTTTTCTCGACGCGGTCGAATC
CGGCAAGCCGATCAGCCAGGCGAAGGGCGAATTGGCGGGTGCCGCCGACATCTGGCGCTATGCGGCAGCACTTGCCCGCG
AACTCTCGGGCGAAAGCTACAATACGCTCGGGGAGGGTACGCTCGGCGTCGTGCTGCGCGAGCCGATCGGCGTCGTATCG
ATCATCACGCCGTGGAACTTCCCTTTCCTGATCGTCAGCCAGAAGCTTCCCTTCGCCCTTGCCGCCGGCTGCACGACGGT
GGTGAAGCCCTCTGAACTCACCTCGGCCTCGACGCTGGTTCTCGGCGAAATCCTGGAAGCGGCCGGCGTGCCCCAGGGGG
TCGTGAACATCATCGTCGGCACGGGGCCGGAGGCCGGCGCGCCGCTCACCACGCACCCGCATGTCGACATGGTCTCCTTT
ACCGGCTCGACCGGAATCGGCCAGCTGACCATGGCGAATGCGGCGCAGACCCTGAAGAAGGTCTCGCTGGAACTCGGCGG
CAAGAACCCGCAGATCGTCTTTCCGGACGCAAACCTGGACGAATTCATCGATGCGGCCGTCTTCGGCGCCTATTTCAATG
CCGGCGAATGCTGCAATGCCGGCTCGCGGCTGATCCTGCACCGCGATATCGCCGAGGAGGTGACGGCGCGCATCGCCAGC
CTCTCGGCCAAGGTCAAGGTCGGCGATCCGCTCGACCCCGAAACGCAGGTCGGCGCGATCATTACGCCGCAGCATCTGCA
AAAGATCGCCGGCTATGTTTCTTCGGCGTCGAACGAAGGCGCGAGAATAGCCCATGGCGGCACCACGCTCGATCTCGGCA
TGGGACAGTTCATGGCGCCGACCATCCTGTCGGCCGTTCGGCCCGAAATGGCCGTGGCCCGGGAGGAAGTCTTCGGGCCG
GTTCTCTCCGTTCTGACTTTCGAGAAGACGGAAGAGGCGATCCGCATCGCCAATTCGATCGATTACGGGCTTTCCGCCGG
AGTCTGGAGCCGCGACTTCGATACCTGCCTGACGATCGGGCGGCGCGTACGCGCCGGCACGGTCTGGATGAACACCTTCA
TGGATGGCGCATCCGAGCTGCCTTTCGGCGGCTACCGGCAATCCGGGCTCGGCCGCGAGCTCGGTCGCCATGCTGTCGAG
GACTATACGGAGACGAAGACGCTCAACATGCATATCGGCCGGCGCAGCAACTGGTGGATGCCGCGCTGA

Protein sequence :
MTVVVRPKALGDYDTREFRMLIDGQWVDGAEGRTIERVAPGHGVVVSRYQAAAKADAERAIAAARRAFDEGPWPRMTASE
RSLILLRAADMIAARADELAFLDAVESGKPISQAKGELAGAADIWRYAAALARELSGESYNTLGEGTLGVVLREPIGVVS
IITPWNFPFLIVSQKLPFALAAGCTTVVKPSELTSASTLVLGEILEAAGVPQGVVNIIVGTGPEAGAPLTTHPHVDMVSF
TGSTGIGQLTMANAAQTLKKVSLELGGKNPQIVFPDANLDEFIDAAVFGAYFNAGECCNAGSRLILHRDIAEEVTARIAS
LSAKVKVGDPLDPETQVGAIITPQHLQKIAGYVSSASNEGARIAHGGTTLDLGMGQFMAPTILSAVRPEMAVAREEVFGP
VLSVLTFEKTEEAIRIANSIDYGLSAGVWSRDFDTCLTIGRRVRAGTVWMNTFMDGASELPFGGYRQSGLGRELGRHAVE
DYTETKTLNMHIGRRSNWWMPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 1e-69 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_3069 YP_005715209.1 Betaine-aldehyde dehydrogenase VFG0082 Protein 5e-70 41