Gene Information

Name : SinmeB_2906 (SinmeB_2906)
Accession : YP_005715046.1
Strain : Sinorhizobium meliloti BL225C
Genome accession: NC_017322
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3044839 - 3045768 bp
Length : 930 bp
Strand : +
Note : TIGRFAM: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; HAMAP: Tetrapyrrole biosynthesis, hydroxymethylbilane synthase; KEGG: smd:Smed_2966 porphobilinogen deaminase; PFAM: Porphobilinogen deaminase, N-terminal; Porphobilinogen deaminase, C-term

DNA sequence :
ATGCAAACGAAACCTTTCCGCATCGGCACGCGCGGCAGCCCGCTGGCGATGGCCCAGACGCATGAAACGCGCGATCGGCT
CGCCGCCGCACATGGTCTGCCGCCGGAAATGTTCGAGATCGTCATCCTTTCCACGAAGGGCGACCGGATCACCGACCGGT
CGCTTGCGGAGATCGGCGGCAAGGGCCTGTTCACCGAAGAGCTTGAGCAGCAGCTTCTGTCGGGAGACCTCGACTTCGCC
GTGCATTCGTCCAAGGACATGCCGACGAAGCTGCCTGAGGGGCTGTTCCTTTCCGCTTTCCTGCCGCGCGAGGACATCCG
CGACGCCTTTGTCGGCCGCTCGGCCAAAAGGCTCGTCGATCTCCCGCAAGGCGCCACCGTCGGCTCGTCTTCGCTGCGCC
GTCAGGCGCTGATCCGGCGGCTTCGGCCCGATATCGACGTGATCACCTATCGCGGACAGGTCGAGACACGCCTGCGCAAG
CTTGCCGAAGGTCAGGTCGACGGCACGCTTCTGGCCTATGCCGGCCTAAGGCGGCTCGGCATGGAGCATGTGCCGACGGA
GCTGCTTGATCCGGAAGAATTTCCGCCGGCGCCGGCCCAGGGCGCGATCTGCGTCGAGGCCCGCATCGGCGACGACCGTA
TCAACACGCTGCTTGCGGCAATCGACGATCCGCGCACACACGAGGCGGTTTCCTGCGAGCGCGGCTTCCTGGCGACACTC
GACGGCTCATGCCGCACGCCGATCGCCGGCTACGCGCAATCGGACGGGACACATATCCGCTTTGCCGGCATGATCCTGAC
GCCCGACGGCACCACCTCCCACCAGATCGAAATCGACGGCAGAGCGGCAGACGCGGAAAGGCTTGGGCAGGAGGCCGGCG
AGCGTATCCGCGCCAAGGCCGGACCGGGTTTCTTCTCGAGCTGGAGCTGA

Protein sequence :
MQTKPFRIGTRGSPLAMAQTHETRDRLAAAHGLPPEMFEIVILSTKGDRITDRSLAEIGGKGLFTEELEQQLLSGDLDFA
VHSSKDMPTKLPEGLFLSAFLPREDIRDAFVGRSAKRLVDLPQGATVGSSSLRRQALIRRLRPDIDVITYRGQVETRLRK
LAEGQVDGTLLAYAGLRRLGMEHVPTELLDPEEFPPAPAQGAICVEARIGDDRINTLLAAIDDPRTHEAVSCERGFLATL
DGSCRTPIAGYAQSDGTHIRFAGMILTPDGTTSHQIEIDGRAADAERLGQEAGERIRAKAGPGFFSSWS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 3e-48 43
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 3e-48 43