Gene Information

Name : SinmeB_2855 (SinmeB_2855)
Accession : YP_005714995.1
Strain : Sinorhizobium meliloti BL225C
Genome accession: NC_017322
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2991075 - 2991932 bp
Length : 858 bp
Strand : +
Note : PFAM: ABC-3; KEGG: smd:Smed_2916 ABC-3 protein

DNA sequence : 
ATGATCGCCACGCTCATCGAGCCGTTCGCCTATAGCTACATGGTGAATGCCATGTGGGTAAGCGCGCTGGTGGGCGCGGT
CTGCGCGTTTCTTTCGGCCTATCTCATGCTGAAGGGCTGGTCGCTGATCGGCGATGCGCTCTCCCACTCGATCGTGCCGG
GCGTCGCCGGGGCCTATATGCTCGGGCTTCCCTTCTCGCTCGGCGCCTTCTTTTCCGGTGCCCTTGCCGCCGGTGCCATG
CTGTTCCTCAACCAGCGCACGCGGCTGAAGGAGGACACGATCATCGGTTTGATCTTCACCTCCTTCTTCGGCCTCGGCCT
GTTCATGGTCTCTCTGTCGCCGACCTCGGTGAACATTCAGACGATCGTGCTCGGCAATATCCTCGCCATCACCCCGGCCG
ACACGTTGCAGCTCGCCATCATCGGCGTCGTCTCACTCATGATCCTGTCCGCCAAGTGGAAGGACCTGATGGTGACCTTC
TTCGACGAAAGCCACGCCCGCTCCATCGGCATCAACACCACCTTTCTGAAGGTGCTCTTCTTCACGCTGCTCTCGGCCTC
GACGGTGGCGGCGCTGCAGACGGTCGGCGCCTTCCTGGTCGTCGCCATGGTCGTCACCCCCGGCGCGACCGCCTATCTCC
TGACCGACCGTTTTCCGCGGCTGATCGTGATCAGCATCGCGATCGGGGCCCTGACGAGCTTCGTCGGCGCCTATGCGAGC
TACTTCCTCGACGGCGCAACCGGCGGCATCATCATCGTGCTGCAGACCGCGATCTTCCTGTTCGCCTTCGTACTTGCCCC
GAAACACGGGCTGCTCGCCGCCCGCCGCCGCGCATCCGAGGCTCTGGAGACCGCATGA

Protein sequence : 
MIATLIEPFAYSYMVNAMWVSALVGAVCAFLSAYLMLKGWSLIGDALSHSIVPGVAGAYMLGLPFSLGAFFSGALAAGAM
LFLNQRTRLKEDTIIGLIFTSFFGLGLFMVSLSPTSVNIQTIVLGNILAITPADTLQLAIIGVVSLMILSAKWKDLMVTF
FDESHARSIGINTTFLKVLFFTLLSASTVAALQTVGAFLVVAMVVTPGATAYLLTDRFPRLIVISIAIGALTSFVGAYAS
YFLDGATGGIIIVLQTAIFLFAFVLAPKHGLLAARRRASEALETA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 9e-81 79
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 9e-81 79
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-80 79
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-80 79
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 9e-81 79

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_2855 YP_005714995.1 ABC transporter BAC0351 Protein 6e-81 79
SinmeB_2855 YP_005714995.1 ABC transporter BAC0441 Protein 2e-69 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_2855 YP_005714995.1 ABC transporter VFG0527 Protein 5e-81 79