Gene Information

Name : SinmeB_2723 (SinmeB_2723)
Accession : YP_005714863.1
Strain : Sinorhizobium meliloti BL225C
Genome accession: NC_017322
Putative virulence/resistance : Unknown
Product : Xylose isomerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.3.1.5
Position : 2829569 - 2830879 bp
Length : 1311 bp
Strand : -
Note : PFAM: Xylose isomerase, TIM barrel domain; TIGRFAM: Xylose isomerase, bacterial type; HAMAP: Xylose isomerase; KEGG: smd:Smed_2789 xylose isomerase

DNA sequence :
GTGAGCACGGGATTTTTCGGCGATATCGCCAAGATCAAATATGAGGGACCGGAAAGCACCAATCCGCTCGCCTTCCGCCA
TTACAATCCGGACGACGTCGTCCTCGGCAAGCGGATGGAGGATCATCTGCGCTTCGCCGTCGCCTACTGGCACACCTTCG
TCTGGCCGGGCGGCGATCCCTTCGGCGGGCAGACCTTCGAACGCCCCTGGTTCAAGGATTCGATGGAAGCCGCCAAGCTG
AAGGCGGATGTCGCCTTCGAATTCTTCCAGCTTCTCGGCGTACCCTACTACTGCTTCCACGACGCGGACGTGCGCCCGGA
GGGGCGGAACTTCGCCGAGAACACGAGCAATCTCAACGCGATCGTCGATTATTTCGCCGGGAAGCAGGGAGAGACCGGCG
TCAAGCTGCTGTGGGGCACGGCGAACCTCTTTTCAAACCGCCGCTTCATGGCGGGGGCTGCGACGAACCCGGACCCGGAC
GTCTTCGCCTTTGCCGCCGCGACGGTGAAGACCTGCATCGACGCGACGCAGCGGCTGGATGGCGAGAACTATGTGCTCTG
GGGCGGACGCGAGGGCTATGAGACCCTGCTCAACACCGACCTGAAGCGCGAGCTCGATCAGCTCGGCCGCTTCCTCAACC
TGGTCGTCGAATACAAGCACAGGATCGGCTTCAAGGGCACGATCCTGATCGAGCCGAAGCCGCAGGAGCCGACCAAGCAC
CAGTACGACTACGACGTCGCGACCGTCTATGGCTTCCTCAAGAGATACGGCCTCGAGAACGAGGTGAAGGTCAACATCGA
GCAGGGCCACGCGATCCTTGCCGGACATTCCTTCGAGCACGAGCTGGCGCTCGCCAATGCGCTCGGCATCTTCGGTTCGA
TCGACATGAACCGCAACGACTACCAGTCCGGCTGGGACACCGACCAGTTCCCGAACAACGTGCCGGAAATGGCGCTCGCC
TATTACCACGTGCTTGCGGGCGGCGGCTTCAAGACCGGCGGCACGAACTTCGACGCGAAGCTGCGCCGGCAGTCGATCGA
CCCCGAAGACCTGCTGATCGGCCATATCGGCGGCATGGATTGCTGCGCGCGCGGCCTCAAGGCGGCCGCGAAGATGATCG
AGGACAAGGCGCTCTCCGCACCGCTCGAAGCGCGCTACGCCGGCTGGAACGTGCCGGAGGCGAAGAAGATGCTCGACGGC
GGCTTCTCGCTCGAGGAGATCGAGGCCTGGGTGCTCAAGTCCGACGTCAACCCGCAGCCGAAATCCGGCAGGCAGGAGCT
TCTGGAAAACGTGGTGAACCGCTACGTCTGA

Protein sequence :
MSTGFFGDIAKIKYEGPESTNPLAFRHYNPDDVVLGKRMEDHLRFAVAYWHTFVWPGGDPFGGQTFERPWFKDSMEAAKL
KADVAFEFFQLLGVPYYCFHDADVRPEGRNFAENTSNLNAIVDYFAGKQGETGVKLLWGTANLFSNRRFMAGAATNPDPD
VFAFAAATVKTCIDATQRLDGENYVLWGGREGYETLLNTDLKRELDQLGRFLNLVVEYKHRIGFKGTILIEPKPQEPTKH
QYDYDVATVYGFLKRYGLENEVKVNIEQGHAILAGHSFEHELALANALGIFGSIDMNRNDYQSGWDTDQFPNNVPEMALA
YYHVLAGGGFKTGGTNFDAKLRRQSIDPEDLLIGHIGGMDCCARGLKAAAKMIEDKALSAPLEARYAGWNVPEAKKMLDG
GFSLEEIEAWVLKSDVNPQPKSGRQELLENVVNRYV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
xylA NP_814326.1 xylose isomerase Not tested Not named Protein 6e-102 50
ef0082 AAM75286.1 EF0082 Not tested Not named Protein 5e-102 50