Gene Information

Name : SinmeB_2513 (SinmeB_2513)
Accession : YP_005714653.1
Strain : Sinorhizobium meliloti BL225C
Genome accession: NC_017322
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2597044 - 2597979 bp
Length : 936 bp
Strand : +
Note : KEGG: smd:Smed_2567 site-specific tyrosine recombinase XerD; TIGRFAM: Tyrosine recombinase XerD; PFAM: Integrase, catalytic core, phage; Integrase, N-terminal SAM-like, phage

DNA sequence :
ATGACGGATATGTCCGCAGCCTACGTCGAAGCCTTCCTGGAAATGATGAGCGCCGAGCGTGGAGCGGCGGCGAACACGCT
GCAATCCTACGAGCGCGACCTCGAGGACGCGCGTTCCTTCCTGCGCTCGCGCGGCACCGGGCTCACCGACGCCTCGGCCG
ACGATCTCAGAAGCTATCTCTCCCATCTCGCAGGCCAGGGCTTCAAAGCGTCGTCGCAGGCGCGGCGGCTCTCGGCCCTC
CGGCAATTTTACAAGTTCCTCTATGCGGAGGGGCTGCGCACGGACGACCCGACGGGCATCCTCGACGCGCCGAAGAAAGC
CCGCACCCTTCCGAAGACCCTCAGCATCGAAGACGTCACCCGGCTGATCGGCCAGGCGGAAGCGGAGGCGAAATCCGGCA
GCGACGACGTGATGGCGAAATTGCGCATGCACGCGCTGATCGAGCTCCTTTATGCGACAGGCATGCGCGTCAGCGAGCTC
GTGTCGCTGCCGGCGAGCGTGCTTGCACAGAACGGGCGTTTTCTCATCATTCGCGGCAAGGGTAACAAGGAAAGGCTCGT
ACCGCTGTCGCAGGCGGCGATCCGCGCCATGCGGGCCTATGGGGAAGCACTGCAGGAAGAGAGTGCGGACAGCCCCTGGC
TGTTCCCCTCCAATGGCAAGTCCGGCCATCTGCCGCGGCAGGTCTTTGCCCGCGACCTCAAGAGCCTTGCGGCACGGGCA
GGCATCCGGGTGGCAGCGATTTGGCCGCACGTGCTGCGCCACGCCTTCGCCAGTCATCTGCTCGCCAACGGCGCCGACCT
TCGTGCCGTACAGGAACTGCTCGGCCATTCAGACATTTCCACGACACAAATCTATACGCATGTGCTGGAAGAACGGCTTC
ACGACCTCGTGCAAAACCATCACCCCCTTGCCAAACAGGCGAAAAAACAGGATTAG

Protein sequence :
MTDMSAAYVEAFLEMMSAERGAAANTLQSYERDLEDARSFLRSRGTGLTDASADDLRSYLSHLAGQGFKASSQARRLSAL
RQFYKFLYAEGLRTDDPTGILDAPKKARTLPKTLSIEDVTRLIGQAEAEAKSGSDDVMAKLRMHALIELLYATGMRVSEL
VSLPASVLAQNGRFLIIRGKGNKERLVPLSQAAIRAMRAYGEALQEESADSPWLFPSNGKSGHLPRQVFARDLKSLAARA
GIRVAAIWPHVLRHAFASHLLANGADLRAVQELLGHSDISTTQIYTHVLEERLHDLVQNHHPLAKQAKKQD

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 4e-42 42
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 4e-42 42