Gene Information

Name : SinmeB_2333 (SinmeB_2333)
Accession : YP_005714475.1
Strain : Sinorhizobium meliloti BL225C
Genome accession: NC_017322
Putative virulence/resistance : Virulence
Product : Aldehyde dehydrogenase (NAD(+))
Function : -
COG functional category : -
COG ID : -
EC number : 1.2.1.3
Position : 2404626 - 2406059 bp
Length : 1434 bp
Strand : -
Note : KEGG: smd:Smed_2414 aldehyde dehydrogenase; PFAM: Aldehyde dehydrogenase domain

DNA sequence :
ATGCTCGACAAGCGGAAATTCTACATCGACGGCAAATGGGTTGAGCCGGCCACGCAGAACGATCTTCTGGTGCTCAATCC
GGCGACCGAGAAGCCGATAGCGGTCATCTCGCTCGGCACCGCCGTCGACGTCGACCGGGCGGTTGCAGCCGCCAAGAAGG
CCTTCGCGAGCTATAGCCGGACGAGCGTCGAGGAACGGCTGGCACTGCTCGAAAAGCTGCTCGCGATCTACAAGCGCCGT
TACGATGAAATGGCCGACACCATCACGGCCGAACTCGGTGCGCCCAGAACGATGAGCCACGAGCAGCAGGCGGATGTGGG
CGTCGGTCATCTGCAGGGCTTCATCGATGCCCTGAAGCGCCTGAAACTCAGGGAAAAGCTGCCGAATGGCGACACGCTCC
TGCGTGAGCCGATCGGCGTCTGCGGTCTCATCACGCCGTGGAACTGGCCGGTCAACCAGATCGCGCTCAAGGTCGTCCCG
GCGCTTGCGACCGGCTGCACCTGCGTCCTGAAACCCAGCGAGTTCACGCCGCTGAACGCCATGCTCTACGCCGAGATGAT
CGAGGAGGCGGGCTTCCCGGCCGGCGTCTTCAACCTCGTCAACGGTGACGGCATCCATGCCGGGGCGGCGTTGTCGAAGC
ACAAGGACATCGACATGATGTCCTTCACCGGTTCGACCCGGGCCGGTATAGCCGTCAGCAAGGACGCCGCCGATACGGTC
AAGCGCGTCACGCTCGAACTCGGCGGCAAGTCGCCGAACATCGTCTTCGCCGATGCCGATATCGAGGAGCGGGTGACCGC
CAGCATTCTCGAATGCTTCAACAATTCCGGCCAGTCCTGCGATGCCCCGACACGTATGCTCGTCGAGCGCAGCGCCTATG
ACGAGGTCGTGGAAATCGCCAGGCGCGTCGGCATGGAGGCGAGGGTCGGCGATCCGACGAAGGTTGGCTCCCATATCGGC
CCGCTCGTCAGCCATATTCAGTTCGAGCGGGTGCAGGCACTGATCGAAGCCGGCGTTGCCGAAGGCGCGACCCTGCTGGC
CGGCGGCCCCGGCAAGCCGGAAGGCTTCGAGACCGGATATTTCGTCCAGCCGACGATCTTCGCCGATGTCGACAATTCCA
TGCGGATCGCGCGCGAGGAAGTGTTCGGACCGGTGCTTTCGATCATTCCCTTCGATACGGAAGAGGAGGCGATCGCGATC
GCCAACGACACGAATTACGGCCTCGCGGCCTATGTGCAGACCCGCGACCGCGAAAGGGCGGAGCGGGTGGCGTCGCGCCT
CCGGGCCGGCATGGTGCACATCAACGGCGGTCCCCACCGCTACGGAAGCCCCTTCGGCGGCTACAAGCAGTCCGGCAACG
GCCGGGAAGGCGGGATGTTCGGGCTCGAGGACTTCCTGGAGGTCAAAACGGTTCACCTGCCGGATGCGGCCTGA

Protein sequence :
MLDKRKFYIDGKWVEPATQNDLLVLNPATEKPIAVISLGTAVDVDRAVAAAKKAFASYSRTSVEERLALLEKLLAIYKRR
YDEMADTITAELGAPRTMSHEQQADVGVGHLQGFIDALKRLKLREKLPNGDTLLREPIGVCGLITPWNWPVNQIALKVVP
ALATGCTCVLKPSEFTPLNAMLYAEMIEEAGFPAGVFNLVNGDGIHAGAALSKHKDIDMMSFTGSTRAGIAVSKDAADTV
KRVTLELGGKSPNIVFADADIEERVTASILECFNNSGQSCDAPTRMLVERSAYDEVVEIARRVGMEARVGDPTKVGSHIG
PLVSHIQFERVQALIEAGVAEGATLLAGGPGKPEGFETGYFVQPTIFADVDNSMRIAREEVFGPVLSIIPFDTEEEAIAI
ANDTNYGLAAYVQTRDRERAERVASRLRAGMVHINGGPHRYGSPFGGYKQSGNGREGGMFGLEDFLEVKTVHLPDAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
hpaE AAO17179.1 HpaE Not tested tcd island Protein 6e-63 47
ORF SG19 AAN62241.1 putative aldehyde dehydrogenase Not tested PAGI-3(SG) Protein 7e-60 43
VC0819 NP_230467.2 aldehyde dehydrogenase Not tested VPI-1 Protein 7e-53 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SinmeB_2333 YP_005714475.1 Aldehyde dehydrogenase (NAD(+)) VFG0082 Protein 3e-53 43