|
Name : SinmeB_1248 (SinmeB_1248) Accession : YP_005713415.1 Strain : Sinorhizobium meliloti BL225C Genome accession: NC_017322 Putative virulence/resistance : Resistance Product : major facilitator superfamily protein Function : - COG functional category : - COG ID : - EC number : - Position : 1327648 - 1328895 bp Length : 1248 bp Strand : + Note : PFAM: Major facilitator superfamily MFS-1; KEGG: smd:Smed_1262 major facilitator transporter DNA sequence : ATGCTCGACAAGAAATTCGTGAGACGCGGTCTGTTCCTCGTCTTCCTCATTCTCTTCCTCGACATCATGGGCATCGCGAT CATCGTGCCGGTGTTGCCGACCTATCTCGAGGAACTGACCGGCGCGGATATCGGCGAGGCCGCGGTCGACGGTGGATGGC TGTTGCTCGTCTACTCGGCGATGCAGTTTCTCTTCGCACCGCTTATCGGGAATCTGAGCGATCGATTCGGGCGTCGGCCG GTCCTGCTTGCGTCCGTGCTGACCTTTGCGCTCGACAACCTGATCTGCGCGCTTGCGACCAGCTATTGGATGCTCTTCAT CGGGCGCAGCCTTGCCGGCATCAGCGGCGCGAGCTTCGGCACGGCATCCGCCTACATTGCCGATGTCAGCGACGATGAGA ATCGCGCCAAGAACTTCGGGCTGATCGGCATTGCCTTCGGCACCGGTTTTGCGCTCGGCCCGGTCATCGGAGGTTTCCTC GGCGAATTGGGCCCGAGAGTGCCCTTTTATGGTGCGGCAGCGCTTTCATTCCTCAATTTCATCATGGGCGTCTTTCTCCT GCCCGAGACGCTCGCCCCGGCCAACCGGCGGCGCTTCGAATGGCACCGGGCAAACCCGCTCGGCGCGCTCAAGCAGATGC GCCATTACCCGGGCATCGGCTGGGTAGGCCTCGTCTTCTTCCTCTACTGGCTGGCTCACGCCGTCTACCCGGCCGTCTGG TCCTTCGTCGGCTCCTATCGCTACGGGTGGAGCGAAGGGCAGATCGGGCTTTCGCTGGGGATCTTCGGCGTCGGCGGCGC AATCGTGATGGCGCTGGTGCTCCCGCGTGTCGTGCCGGCACTGGGAGAAAGGCGAACGGCGGCACTCGGGCTCACCTTCA CGGCCCTCGGGATGGCGGGCTATGCGGCCGCCTGGGAGGGGTGGATGGTCTACGCGGTGATCGTCGCGACCGCGCTCGAA AGCCTAGCCGATCCACCGCTCCGCAGCATAGCCTCCGTCCATGTCCCGCCGTCGGCACAGGGCGAGCTGCAAGGTGCGCT CACCAGCATATCGAGCATTACGACGATCCTCGGACCTCTGATGTTCACGCAGATTTTCGCCTTTTTCACCGACCCTGCAG CCGCCCATAGCTTTGCCGGCGCTCCCTATGCCCTGGCAGGCTGCTTGATCGTCGCCGCGCTGGTGATCTTCCTTGCCAAG GTCGGCGCCGGCCGGGGAGGCGCCGTCCGCGGTGCCGTGCGAGCGTGA Protein sequence : MLDKKFVRRGLFLVFLILFLDIMGIAIIVPVLPTYLEELTGADIGEAAVDGGWLLLVYSAMQFLFAPLIGNLSDRFGRRP VLLASVLTFALDNLICALATSYWMLFIGRSLAGISGASFGTASAYIADVSDDENRAKNFGLIGIAFGTGFALGPVIGGFL GELGPRVPFYGAAALSFLNFIMGVFLLPETLAPANRRRFEWHRANPLGALKQMRHYPGIGWVGLVFFLYWLAHAVYPAVW SFVGSYRYGWSEGQIGLSLGIFGVGGAIVMALVLPRVVPALGERRTAALGLTFTALGMAGYAAAWEGWMVYAVIVATALE SLADPPLRSIASVHVPPSAQGELQGALTSISSITTILGPLMFTQIFAFFTDPAAAHSFAGAPYALAGCLIVAALVIFLAK VGAGRGGAVRGAVRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tetA | YP_006098396.1 | tetracycline resistance protein | Not tested | Tn2411 | Protein | 4e-49 | 41 |
| tetA(A) | ACK44537.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-49 | 41 |
| tetA(A) | AGK07027.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-49 | 41 |
| tetA(A) | AGK07085.1 | TetA(A) | Not tested | SGI1 | Protein | 3e-49 | 41 |
| tetA(A) | ACN81011.1 | TetA(A) | Not tested | AbaR5 | Protein | 3e-49 | 41 |
| tetA | CAJ77066.1 | Tetracycline resistance protein | Not tested | AbaR1 | Protein | 2e-49 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| SinmeB_1248 | YP_005713415.1 | major facilitator superfamily protein | NC_011586.7045189.p0 | Protein | 2e-47 | 41 |
| SinmeB_1248 | YP_005713415.1 | major facilitator superfamily protein | AY264780.2.gene3.p01 | Protein | 6e-48 | 41 |
| SinmeB_1248 | YP_005713415.1 | major facilitator superfamily protein | NC_010410.6002597.p0 | Protein | 1e-49 | 41 |
| SinmeB_1248 | YP_005713415.1 | major facilitator superfamily protein | CP001485.1.gene2821. | Protein | 1e-49 | 41 |
| SinmeB_1248 | YP_005713415.1 | major facilitator superfamily protein | AF534183.gene.p01 | Protein | 1e-49 | 41 |
