Gene Information

Name : SFxv_4928 (SFxv_4928)
Accession : YP_005711977.1
Strain :
Genome accession: NC_017319
Putative virulence/resistance : Unknown
Product : transposase/IS protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 72329 - 72991 bp
Length : 663 bp
Strand : +
Note : -

DNA sequence :
ATGGACTTCCTGGAGCATCTGCTTCATGAAGAAAAACTGGCACGTCATCAACGTAAACAGGCGATGTATACCCGAATGGC
AGCCTTCCCGGCGGTGAAAACGTTCGAAGAGTATGACTTCACATTCGCCACCGGAGCACCGCAGAAGCAACTCCAGTCGT
TACGCTCACTCAGCTTCATAGAACGTAATGAAAATATCGTATTACTGGGGCCATCAGGTGTGGGGAAAACCCATCTGGCA
ATAGCGATGGGCTATGAAGCAGTCCGTGCAGGTATCAAAGTTCGCTTCACAACAGCAGCAGATCTGTTACTTCAGTTATC
TACGGCACAACGTCAGGGCCGTTATAAAACGACGCTTCAGCGTGGAGTAATGGCCCCCCGCCTGCTCATCATTGATGAAA
TAGGCTATCTGCCGTTCAGTCAGGAAGAAGCAAAACTGTTCTTCCAGGTCATCGCTAAACGTTACGAAAAGAGCGCAATG
ATCCTGACATCCAATCTACCGTTCGGGCAGTGGGATCAAACGTTCGCCGGTGATGCAGCACTGACCTCAGCGATGCTGGG
CCGTATCTTACACCACTCACATGTCGTTCAAATCAAAGGAGAAAGCTATCGACTCAGACAGAAACGAAAGGCCGGGGTTA
TAGCAGAAGCTAATCCTGAGTAA

Protein sequence :
MDFLEHLLHEEKLARHQRKQAMYTRMAAFPAVKTFEEYDFTFATGAPQKQLQSLRSLSFIERNENIVLLGPSGVGKTHLA
IAMGYEAVRAGIKVRFTTAADLLLQLSTAQRQGRYKTTLQRGVMAPRLLIIDEIGYLPFSQEEAKLFFQVIAKRYEKSAM
ILTSNLPFGQWDQTFAGDAALTSAMLGRILHHSHVVQIKGESYRLRQKRKAGVIAEANPE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
y1094 CAD33719.1 ORF B protein Not tested PAI I 536 Protein 7e-86 99
y1093 CAD66188.1 transposase Orf B, insertion element IS100 Not tested PAI III 536 Protein 3e-101 99
unnamed CAB46598.1 IS100 transposase Not tested HPI Protein 4e-102 99
s0036 CAD33774.1 ORF B protein Not tested PAI I 536 Protein 4e-102 99
y1093 CAD42087.1 OrfB protein of IS100 transposase Not tested PAI II 536 Protein 4e-102 99
YPTB1586 YP_070114.1 transposase/IS protein Not tested HPI Protein 6e-102 99
orfB CAE85183.1 OrfB protein, transposase, IS100 Not tested PAI V 536 Protein 4e-102 99
unnamed CAA21402.1 - Not tested HPI Protein 6e-102 99
api84 CAF28558.1 putative transposase Not tested YAPI Protein 4e-102 99
y1093 CAC43411.1 IS100 transposase; transposase ORFA Not tested PAI III 536 Protein 4e-102 99
aec58 AAW51741.1 Aec58 Not tested AGI-3 Protein 4e-102 99
YPO1901 YP_002346891.1 transposase/IS protein Not tested HPI Protein 7e-102 99
y2410 NP_669717.1 transposase/IS protein Not tested HPI Protein 7e-102 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_4928 YP_005711977.1 transposase/IS protein VFG1460 Protein 4e-86 99
SFxv_4928 YP_005711977.1 transposase/IS protein VFG1627 Protein 2e-102 99
SFxv_4928 YP_005711977.1 transposase/IS protein VFG1606 Protein 2e-102 99
SFxv_4928 YP_005711977.1 transposase/IS protein VFG1663 Protein 1e-101 99
SFxv_4928 YP_005711977.1 transposase/IS protein VFG1515 Protein 2e-102 99