Gene Information

Name : SFxv_4919 (SFxv_4919)
Accession : YP_005711968.1
Strain :
Genome accession: NC_017319
Putative virulence/resistance : Unknown
Product : IS629 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 66649 - 67362 bp
Length : 714 bp
Strand : +
Note : -

DNA sequence :
TTGTTACGGGAAGGTATCAGAGTGGCCAGATGCACTGTGGCACGTCTCATGGCGGTTATGGGACTTGCCGGTGTTCTCCG
GGGTAAAAAGGTCCGTACGACCATCAGCCGGAAAGCCGTTGCCGCAGGCGACCGCGTAAACCATCAGTTCGTGGCAGAAC
GACCTGACCAGCTGTGGGTGGCTGATTTTACTTACGTCAGCACATGGCAGGGCTTCGTCTATGTGGCGTTCATCATTGAT
GTGTTTGCCGGATGCATCGTGGGGTGGCGGGTCTCATCGTCCATGGAAACGACATTCGTGCTGGATGCACTGGAGCAGGC
GTTATGGGCCCGTCGACCGTCCGGCACGGTCCATCACAGTGATAAAGGTTCTCAGTATGTATCGCTGGCCTACACACAGC
GGCTTAAGGAAGCCGGATTACTGGCATCAACAGGAAGTACAGGCGACTCGTATGACAACGCGATGGCGGAGAGCATCAAT
GGTCTTTACAAAGCGGAGGTAATACACCGTAAGAGCTGGAAAAACCGTGCAGAAGTGGAACTGGCCACACTCACGTGGGT
GGACTGGTATAACAATCGACGATTGCTGGAAAGGCTGGGCCATACTCCTCCGGCAGAAGCAGAAAAGCTTATTATGCTTC
CATCGGAAACGATGATCTGGCAGCCTGAGTTCACAGATAAAACACTCTCCAGGAAACCCGGGGCGGTTCAGTGA

Protein sequence :
MLREGIRVARCTVARLMAVMGLAGVLRGKKVRTTISRKAVAAGDRVNHQFVAERPDQLWVADFTYVSTWQGFVYVAFIID
VFAGCIVGWRVSSSMETTFVLDALEQALWARRPSGTVHHSDKGSQYVSLAYTQRLKEAGLLASTGSTGDSYDNAMAESIN
GLYKAEVIHRKSWKNRAEVELATLTWVDWYNNRRLLERLGHTPPAEAEKLIMLPSETMIWQPEFTDKTLSRKPGAVQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL67406.1 putative transposase Not tested PAI II CFT073 Protein 2e-91 99
c5178 NP_757026.1 transposase IS629 Not tested PAI II CFT073 Protein 5e-91 99
unnamed AAL67398.1 putative transposase Not tested PAI II CFT073 Protein 3e-91 99
Z4334 NP_289559.1 IS629 transposase Not tested OI-122 Protein 4e-88 98
S4063 NP_839232.1 IS629 orfB Not tested SHI-2 Protein 1e-87 98
tnpC AAD44736.1 TnpC Not tested SHI-2 Protein 4e-84 98
ECO111_3721 YP_003236061.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-91 98
ECO111_3776 YP_003236111.1 putative IS629 transposase OrfB Not tested LEE Protein 9e-91 98
IS629 CAI43909.1 transposase for IS629 1 Not tested LEE Protein 3e-88 97
IS629 CAC37926.1 transposase for IS629 Not tested LEE Protein 3e-88 97
IS629 CAI43821.1 transposase for IS629 Not tested LEE Protein 3e-88 97
c5213 NP_757061.1 transposase IS629 Not tested PAI II CFT073 Protein 8e-91 97
Z1221 NP_286756.1 transposase Not tested TAI Protein 7e-91 96
ECO103_3585 YP_003223443.1 IS629 transposase OrfB Not tested LEE Protein 6e-88 96
ORF_34 AAZ04444.1 putative IS629 transposase Not tested PAI I APEC-O1 Protein 3e-90 96
Z1660 NP_287162.1 transposase for IS629 Not tested TAI Protein 7e-91 96
APECO1_3499 YP_854312.1 transposase for IS629 Not tested PAI I APEC-O1 Protein 4e-90 96
Z1198 NP_286733.1 transposase Not tested TAI Protein 2e-90 96
Z1638 NP_287141.1 transposase Not tested TAI Protein 2e-90 96
IS629 CAI43840.1 transposase for IS629 Not tested LEE Protein 1e-86 95
unnamed CAD42083.1 hypothetical protein Not tested PAI II 536 Protein 3e-87 94

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_4919 YP_005711968.1 IS629 ORF2 VFG1602 Protein 1e-87 94