Gene Information

Name : SFxv_5053 (SFxv_5053)
Accession : YP_005712102.1
Strain :
Genome accession: NC_017319
Putative virulence/resistance : Unknown
Product : IS600 ORF1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 168379 - 168681 bp
Length : 303 bp
Strand : -
Note : -

DNA sequence : 
ATGAGCAGAAAAACCCGACGTTACTCTAAAGAGTTCAAAGCCGAAGCTGTCAGAACGGTTCTTGAAAATCAACTTTCGAT
CAGTGAAGACGCTTCCCGATTATCTCTTCCTGAAGGCACTTTAGGACAATGGGTTACCGCCGCCAGAAAAGGGCTCGGTA
CTCCTGGTTCCCGCACGGTGGCTGAACTGGAATCTGAAATTCTGCAACTGCGTAAGGCGTTAAATGAAGCTCGCCTTGAG
CGCGATATATTAAAAAAAGCAACAGCGTATTTTGCACAGGAGTCGCTGAAAAATACGCGTTAA

Protein sequence : 
MSRKTRRYSKEFKAEAVRTVLENQLSISEDASRLSLPEGTLGQWVTAARKGLGTPGSRTVAELESEILQLRKALNEARLE
RDILKKATAYFAQESLKNTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tnpJ AAD44752.1 TnpJ Not tested SHI-2 Protein 5e-39 98
unnamed AAQ07469.1 TnpJ-like protein Not tested Not named Protein 5e-39 98
hp2 AAC61714.1 Hp2 Not tested PAI I CFT073 Protein 9e-39 97
c3576 NP_755451.1 hypothetical protein Not tested PAI I CFT073 Protein 1e-38 97
unnamed AAF09021.1 unknown Not tested SHI-O Protein 2e-38 97
unnamed AAF09029.1 unknown Not tested SHI-O Protein 2e-38 97
Z1150 NP_286685.1 hypothetical protein Not tested TAI Protein 7e-33 96
Z1589 NP_287093.1 hypothetical protein Not tested TAI Protein 7e-33 96

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_5053 YP_005712102.1 IS600 ORF1 VFG1707 Protein 3e-39 97