Gene Information

Name : SFxv_5051 (SFxv_5051)
Accession : YP_005712100.1
Strain :
Genome accession: NC_017319
Putative virulence/resistance : Unknown
Product : ISSfl4 ORF3
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 166422 - 167513 bp
Length : 1092 bp
Strand : -
Note : -

DNA sequence :
ATGGTAGTGTCCGCTATTGCCAGTACACCTCAGTGTGATGTCATCGTTCAGGCACCACTTCCCCCTAAACCGATCGAACG
CGGTTATGCCAGTGCAGGGTTACTTGCACGGATCCTGGTCAGCAAATATATGGAACATATCCCTTTATATCGCCAGTCAG
AAATATACGCGCGACAGGGCGTGGAGCTGAGCCGTAATACCATGGTGCGCTGGGTATCAGAAATGGCAGACAAACTCCGT
CCTCTGTATATAGCGCTGAATGACTATGTTCTGGAGGCAGGAAAGGTGCACGCAGATGACACTCCGGTGAAAGTACTGGC
CCCGGGGAACGGAAAGACGAAAACGGGTCGTCTGTGGGTATACGTCAGGGATGATCGTAATGCGGGTTCATCCCTGCCGG
CAGCCGTCTGGTTCGCGTATTCGGCAGATCGCAAAGGAGAACATCCGCAGCTCCACCTGGCAAAGTATCAGGGCGTACTG
CAGGCTGATGCCTATGCAGGTTATAACGTACTGTACGAAACGGGCCGGGTGAAGGAAGCCGGGTGCCTGGCCCACGCCCG
CCGAAAAACCCATGACGAGGATGTGCGCCGTCCGACAGAAATGACTCAGGAAGCGCTCAGACGGATAGCAGAGTTATACG
ACATAGAAGCGGAGATACGTGGCAGTCCGGCAGAGGAACGGCTTGCAGTCAGAAAAGCCAGAAGCGTCCAGTTGATGCAG
TCGTTGTACGACTGGATACAGTTGCAGAGGAAAACGCTGTCGAAACATGCGGAGATGGCGAAGGCGTTCGACTATATCCT
GAATCACTGGAATGCGCTGAACGAGTTCTGTCGTGACGGCTGGGTGGAAATAGACAACAACATCGGTGAAAACGCGTTAC
GATCGGTGGCGGTTGGAAGAAAAAATTATCTCTTTTTCGGCTCAGACAAGGGAGGAGAAAGTGCGGCGATCATCTACAGT
CTGCTGGTCACCTGCAAACAGAACGAAGTGGAGCCGGAGGACTGGTTGCGCGAAGTGATCGAGAAGCTCAATGACTGGCC
GTCGAACCAAGTGCATGAACTGCTGCCCTGGAACTTCTCGTCTGTAAAATAA

Protein sequence :
MVVSAIASTPQCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIPLYRQSEIYARQGVELSRNTMVRWVSEMADKLR
PLYIALNDYVLEAGKVHADDTPVKVLAPGNGKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQLHLAKYQGVL
QADAYAGYNVLYETGRVKEAGCLAHARRKTHDEDVRRPTEMTQEALRRIAELYDIEAEIRGSPAEERLAVRKARSVQLMQ
SLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGWVEIDNNIGENALRSVAVGRKNYLFFGSDKGGESAAIIYS
LLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
s0025 CAD33772.1 IS66-like transposase Not tested PAI I 536 Protein 9e-94 67
unnamed AAK00463.1 unknown Not tested SHI-1 Protein 3e-98 66
SF2972 NP_708746.1 hypothetical protein Not tested SHI-1 Protein 1e-95 66
c3563 NP_755438.1 hypothetical protein Not tested PAI I CFT073 Protein 3e-108 65
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 8e-109 63
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 9e-109 63
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 1e-108 63
unnamed AAC31494.1 L0015 Not tested LEE Protein 4e-109 63
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 5e-109 63
tnp AEA34686.1 transposase Not tested Not named Protein 2e-110 63
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 5e-109 63
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 3e-108 62
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 3e-108 62
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 4e-109 62
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-98 56
RS12 AAP82957.1 transposase Not tested PAPI-2 Protein 9e-54 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_5051 YP_005712100.1 ISSfl4 ORF3 VFG1513 Protein 5e-94 67
SFxv_5051 YP_005712100.1 ISSfl4 ORF3 VFG0634 Protein 6e-96 66
SFxv_5051 YP_005712100.1 ISSfl4 ORF3 VFG1700 Protein 1e-108 65
SFxv_5051 YP_005712100.1 ISSfl4 ORF3 VFG0793 Protein 2e-109 63