Gene Information

Name : spa40 (SFxv_4999)
Accession : YP_005712048.1
Strain :
Genome accession: NC_017319
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein SpaS
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 133060 - 134088 bp
Length : 1029 bp
Strand : +
Note : -

DNA sequence :
ATGGCAAATAAAACAGAAAAGCCGACACCTAAAAAACTAAAGGATGCCGCAAAAAAAGGACAGTCATTTAAATTTAAGGA
TTTAACGACTGTTGTTATTATTCTGGTAGGGACATTTACTATAATATCATTCTTTTCCTTAAGTGATGTAATGCTCTTAT
ACAGATATGTAATAATTAATGACTTCGAAATTAATGAGGGTAAATACTTTTTTGCAGTGGTTATTGTCTTTTTTAAGATA
ATTGGCTTCCCACTTTTTTTCTGTGTTCTTTCGGCTGTGTTGCCAACATTGGTTCAAACAAAGTTTGTTCTTGCGACTAA
AGCTATCAAGATTGATTTTTCAGTATTAAACCCTGTTAAAGGGTTAAAAAAAATATTTAGTATAAAGACAATAAAAGAAT
TTTTCAAAAGCATTCTGCTTCTTATTATTCTAGCATTAACAACCTATTTCTTTTGGATTAATGACCGAAAAATAATTTTT
TCTCAGGTGTTTTCTAGTGTTGATGGCTTATATCTTATTTGGGGGAGGCTGTTTAAGGATATAATATTATTTTTCTTGGC
ATTTTCTATTCTTGTTATTATTCTTGACTTTGTGATTGAGTTCATTTTATACATGAAAGATATGATGATGGATAAACAGG
AGATAAAAAGAGAATATATAGAGCAAGAGGGACACTTTGAGACAAAGTCGAGAAGGCGTGAGTTGCATATCGAGATTCTT
TCAGAGCAGACTAAATCTGATATACGTAATTCAAAATTAGTGGTAATGAACCCGACTCATATTGCAATTGGTATTTATTT
TAATCCAGAAATAGCGCCTGCACCTTTTATTTCTCTCATTGAAACTAACCAGTGTGCCTTGGCTGTCAGAAAATATGCAA
ATGAAGTTGGTATACCGACTGTGCGTGATGTGAAATTAGCTAGAAAACTATATAAAACACATACAAAATATAGTTTTGTT
GATTTTGAACACTTGGATGAAGTCCTACGTCTTATTGTTTGGCTTGAGCAGGTTGAAAACACTCATTAA

Protein sequence :
MANKTEKPTPKKLKDAAKKGQSFKFKDLTTVVIILVGTFTIISFFSLSDVMLLYRYVIINDFEINEGKYFFAVVIVFFKI
IGFPLFFCVLSAVLPTLVQTKFVLATKAIKIDFSVLNPVKGLKKIFSIKTIKEFFKSILLLIILALTTYFFWINDRKIIF
SQVFSSVDGLYLIWGRLFKDIILFFLAFSILVIILDFVIEFILYMKDMMMDKQEIKREYIEQEGHFETKSRRRELHIEIL
SEQTKSDIRNSKLVVMNPTHIAIGIYFNPEIAPAPFISLIETNQCALAVRKYANEVGIPTVRDVKLARKLYKTHTKYSFV
DFEHLDEVLRLIVWLEQVENTH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECs3721 NP_311748.1 surface presentation of antigens protein SpaS Not tested LIM Protein 4e-72 52
spaS NP_461808.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 2e-68 50
spaS YP_217806.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 5e-67 50
spaS NP_457281.1 secretory protein (associated with virulence) Virulence SPI-1 Protein 7e-68 50
spaS NP_806490.1 surface presentation of antigens protein SpaS Virulence SPI-1 Protein 7e-68 50
spaS AAS66868.1 SpaS Not tested SSR-2 Protein 6e-71 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spa40 YP_005712048.1 surface presentation of antigens protein SpaS VFG1015 Protein 5e-144 100
spa40 YP_005712048.1 surface presentation of antigens protein SpaS VFG0548 Protein 1e-68 50
spa40 YP_005712048.1 surface presentation of antigens protein SpaS VFG1770 Protein 4e-50 42
spa40 YP_005712048.1 surface presentation of antigens protein SpaS VFG2452 Protein 9e-56 41