Gene Information

Name : SFxv_4959 (SFxv_4959)
Accession : YP_005712008.1
Strain :
Genome accession: NC_017319
Putative virulence/resistance : Unknown
Product : IS600 ORF2
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 96104 - 96814 bp
Length : 711 bp
Strand : +
Note : -

DNA sequence :
GTGTATATCCGCACTCGCGAAACATATGGAACCCGGCGGCTCCAGACGGAGCTGGCAGATAACGGAATTATCGTCGGTCG
TGACAGACTGGCACGTCTTCGTAAGGAGCTGAGGCTGCACTGTAAGCAGAAACGCAAGTTCAGGGCGACCACAAACTCTG
ACCACAATCTGCCGGTTACGCCGAATCTGCTGAATCAGAACTTTACGCCCACAGCACCTAATCAGGTCTGGGTCGCAGAT
ATAACGTATGTTGCCACCCGGGAAGGATGGCTGTATCTCGCCGGCGTCAAAGATGTTTATACGTGCGAAATTGTCGGTTA
CGCCATGGGAGAGCGCATGATGAAAGAGTTGACGGGTAAAGCCCTGTTTATGGCGCTCAGGAGCCAGCGCCTACCTGCCG
GGCTAATCCACCACACCGATCGAGGTTCACAGTACTGCGCATACGATTACAGGGTCATACAGGAGCAGTCTGGTCTGAAA
ACATCAATGTCGCGTAAAGGTAACTGTTACGACAACGCTCCGATGGAAAGCTTCTGGGGAACGCTGAAAAATGAAAGCCT
GAGCCACTATCGTTTTAAGAGCCGGGATGAGGCCATCTCAGTAATACGGGAATACATTGAGATTTTCTACAATCGTCAGC
GTCGTCACTCTCGTCTGGGGAATATCTCCCCGGCAGCCTTCAGGGAAAAATATCATCAGATGGCTGCTTAA

Protein sequence :
MYIRTRETYGTRRLQTELADNGIIVGRDRLARLRKELRLHCKQKRKFRATTNSDHNLPVTPNLLNQNFTPTAPNQVWVAD
ITYVATREGWLYLAGVKDVYTCEIVGYAMGERMMKELTGKALFMALRSQRLPAGLIHHTDRGSQYCAYDYRVIQEQSGLK
TSMSRKGNCYDNAPMESFWGTLKNESLSHYRFKSRDEAISVIREYIEIFYNRQRRHSRLGNISPAAFREKYHQMAA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1134 NP_286669.1 hypothetical protein Not tested TAI Protein 5e-104 95
Z1573 NP_287077.1 hypothetical protein Not tested TAI Protein 5e-104 95
unnamed AAF09030.1 unknown Not tested SHI-O Protein 9e-104 94
tnpI AAD44751.1 TnpI Not tested SHI-2 Protein 9e-104 94
unnamed AAF09022.1 unknown Not tested SHI-O Protein 9e-104 94
c3575 NP_755450.1 transposase insF Not tested PAI I CFT073 Protein 1e-103 94
hp1 AAC61713.1 Hp1 Not tested PAI I CFT073 Protein 1e-103 94
unnamed AAQ07468.1 TnpI-like protein Not tested Not named Protein 2e-103 93
unnamed AAB86997.1 hypothetical 31 KD protein Not tested SHI-1 Protein 1e-103 93
tnpA1133 ACK44540.1 TnpA Not tested SGI1 Protein 1e-44 46
orfB AGK07032.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-44 46
orfB AGK07090.1 IS1133 transposase; OrfB Not tested SGI1 Protein 1e-44 46
unnamed AAL57581.1 transposase 1 Not tested LEE Protein 1e-40 44
ECO111_3732 YP_003236068.1 putative IS3 transposase InsF Not tested LEE Protein 2e-40 44
insF CAC43414.1 transposase of insertion element IS3 Not tested PAI III 536 Protein 9e-41 44
unnamed AAL57519.1 transposase 1 Not tested LEE Protein 3e-40 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_4959 YP_005712008.1 IS600 ORF2 VFG1706 Protein 6e-104 94
SFxv_4959 YP_005712008.1 IS600 ORF2 VFG1631 Protein 5e-41 44