Gene Information

Name : SFxv_4954 (SFxv_4954)
Accession : YP_005712003.1
Strain :
Genome accession: NC_017319
Putative virulence/resistance : Unknown
Product : ISSfl3 orfC,D
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 90766 - 92367 bp
Length : 1602 bp
Strand : -
Note : -

DNA sequence : 
ATGAACAATGAACTCCCCGATGATATTGAGCTGCTTAAAGCCATGTTGCGTAAGCAACAGAGTCGGCTTCGACAGTATGC
CTGTCAGGTCGCGGGCTATGAGCAGGAAATTGAACGGCTGAAAGCGCAACTCGACAGGTTGCGTCGTATGTTGTTCGGCC
AGAGTTCAGAGAAAAAGCGTCATAAGCTTGAAAATCAGATCCGACAGGCAGAAAAACGACTGTCGGAACTGGAAAACCGG
CTGAACACAGCCAGAAATCTTCTGGAAGATGCATCGTCAGTCACAGATTCACCTGACACCAGTCCCCCGTCAGAAAACCC
GATCGCCAGTAAGCCTGAATTCCCGGGACGAAAATCTTCACGAAAACCGCTGCCGGCAGAACTTCCCCGGGAGACACATC
GCCTTCTGCCTGCTGAAACCAGTTGCCCGGCCTGTGGAGGTGTTCTGAAAGAAATGGGGGAAACAATCTCAGAGCAACTG
GATATCATTAATACCGCCTTTAAAGTTATCGAAACCATACGTCCCAAACTGGCCTGTAGCCGGTGTGATGTCATCGTTCA
GGCACCACTTCCTCCTAAACCGATCGAACGCGGTTATGCCAGTGCAGGGTTACTTGCACGGATCCTGGTCAGCAAATATA
TGGAACATATCCCTTTATATCGCCAGTCAGAAATATACGCGCGACAGGGCGTGGAGCTGAGCCGTAATACCATGGTGCGC
TGGGTATCAGAAATGGCAGACAAACTCCGTCCTCTGTATATAGCGCTGAATGACTATGTTCTGGAGGCAGGAAAGGTGCA
CGCAGATGACACTCCGGTGAAAGTACTGGCCCCGGGGAACGGAAAGACGAAAACGGGTCGTCTGTGGGTATACGTCAGGG
ATGATCGTAATGCGGGTTCATCCCTGCCGGCAGCCGTCTGGTTCGCGTATTCGGCAGATCGCAAAGGAGAACATCCGCAG
CTCCACCTGGCAAAGTATCAGGGCGTACTGCAGGCTGATGCCTATGCAGGTTATAACGTACTGTACGAAACGGGCCGGGT
GAAGGAAGCCGGGTGCCTGGCCCACGCCCGCCGAAAAATCCATGACGAGGATGTGCGCCGTCCGACAGAAATGACTCAGG
AAGCGCTCAGACGGATAGCAGAGTTATACGACATAGAAGCGGAGATACGTGGCAGTCCGGCAGAGGAACGGCTTGCAGTC
AGAAAAGCCAGAAGCGTCCAGTTGATGCAGTCGTTGTACGACTGGATACAGTTGCAGAGGAAAACGCTGTCGAAACATGC
GGAGATGGCGAAGGCGTTCGACTATATCCTGAATCACTGGAATGCGCTGAACGAGTTCTGTCGTGACGGCCGGGTGGAAA
TAGACAACAACATCGGTGAAAACGCGTTACGATCGGTGGCGGTTGGAAGAAAAAATTATCTCTTTTTCGGCTCAGACAAG
GGAGGAGAAAGTGCGGCGATCATCTACAGTCTGCTGGTCACCTGCAAACAGAACGAAGTGGAGCCGGAGGACTGGTTGCG
CGAAGTGATCGAGAAGCTCAATGACTGGCCGTCGAACCAAGTGCATGAACTGCTGCCCTGGAACTTCTCGTCTGTAAAAT
AA

Protein sequence : 
MNNELPDDIELLKAMLRKQQSRLRQYACQVAGYEQEIERLKAQLDRLRRMLFGQSSEKKRHKLENQIRQAEKRLSELENR
LNTARNLLEDASSVTDSPDTSPPSENPIASKPEFPGRKSSRKPLPAELPRETHRLLPAETSCPACGGVLKEMGETISEQL
DIINTAFKVIETIRPKLACSRCDVIVQAPLPPKPIERGYASAGLLARILVSKYMEHIPLYRQSEIYARQGVELSRNTMVR
WVSEMADKLRPLYIALNDYVLEAGKVHADDTPVKVLAPGNGKTKTGRLWVYVRDDRNAGSSLPAAVWFAYSADRKGEHPQ
LHLAKYQGVLQADAYAGYNVLYETGRVKEAGCLAHARRKIHDEDVRRPTEMTQEALRRIAELYDIEAEIRGSPAEERLAV
RKARSVQLMQSLYDWIQLQRKTLSKHAEMAKAFDYILNHWNALNEFCRDGRVEIDNNIGENALRSVAVGRKNYLFFGSDK
GGESAAIIYSLLVTCKQNEVEPEDWLREVIEKLNDWPSNQVHELLPWNFSSVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ECO103_3554 YP_003223421.1 hypothetical protein Not tested LEE Protein 2e-149 64
Z4317 NP_289543.1 hypothetical protein Not tested OI-122 Protein 4e-149 64
st57 CAC81895.1 ST57 protein Not tested LEE II Protein 2e-127 62
aec53 AAW51736.1 Aec53 Not tested AGI-3 Protein 1e-148 59
Z4340 NP_289564.1 hypothetical protein Not tested OI-122 Protein 1e-116 57
unnamed AAL57570.1 unknown Not tested LEE Protein 2e-133 56
unnamed CAI43806.1 hypothetical protein Not tested LEE Protein 1e-133 56
unnamed AAC31494.1 L0015 Not tested LEE Protein 9e-134 55
tnp AEA34686.1 transposase Not tested Not named Protein 6e-135 55
Z1131 NP_286666.1 hypothetical protein Not tested TAI Protein 7e-133 55
Z1570 NP_287074.1 hypothetical protein Not tested TAI Protein 7e-133 55
unnamed ACU09439.1 IS66 family element transposase Not tested LEE Protein 2e-133 55
ECs4547 NP_312574.1 hypothetical protein Not tested LEE Protein 3e-133 55
Z4337 NP_289562.1 hypothetical protein Not tested OI-122 Protein 1e-133 55
Z5098 NP_290249.1 prophage-associated protein Not tested LEE Protein 1e-133 55
unnamed CAC39285.1 hypothetical protein Not tested LPA Protein 1e-133 55
unnamed AAL08460.1 unknown Not tested SRL Protein 6e-97 53
Z1600 NP_287104.1 hypothetical protein Not tested TAI Protein 3e-118 51
Z1161 NP_286696.1 hypothetical protein Not tested TAI Protein 3e-118 51
BCAM0248 YP_002232880.1 putative transposase Not tested BcenGI11 Protein 2e-121 50
tnp AEA34687.1 IS66 family transposase Not tested Not named Protein 2e-75 47

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
SFxv_4954 YP_005712003.1 ISSfl3 orfC,D VFG0793 Protein 5e-134 55
SFxv_4954 YP_005712003.1 ISSfl3 orfC,D VFG1051 Protein 3e-97 53
SFxv_4954 YP_005712003.1 ISSfl3 orfC,D VFG1736 Protein 9e-98 52