Gene Information

Name : fagA1 (CULC809_00043)
Accession : YP_005709678.1
Strain : Corynebacterium ulcerans 809
Genome accession: NC_017317
Putative virulence/resistance : Virulence
Product : integral membrane protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 42354 - 43421 bp
Length : 1068 bp
Strand : -
Note : ABC-type Fe3+-siderophore transport system, permease component

DNA sequence :
ATGGTTTCGACCGCCACATCCAGTTCTAACCCGCACCGCAGTTTCTTTGTGAAGCATCCACGCAACACACAACGAACGCG
CCGACCGTTAATCGCCGTAGTAGTGCTACTTGCAGTATTACTCGTAGCGGTAAGCGTCGTAAGCGTCATGGTCGGCGCGA
GGCTTATCCCTCTCCCCGAGATCATCAACGCCATCCTCCACCCGGATCCCACTAATGTGTCTTCCACGATTGTGTGGGAT
AGGAGAATCCCCCGCACCCTCCTTGCTATTGTCGCCGGCATGTCTCTTGGCCTGGCTGGAACGCTCTCGCAAGCACTCAC
ACGCAATCCGCTGGCAGACACCGGAGCATTGGGCATTAACTCGGGTGCTGCTTTTGCCATCGTGGTAGGCATCGCTCTCT
TTGGCGCGTCTTCCTCGTGGGTGTTCTTAGCGCTAGCTCTCGCGGGAGCGTGTGCCGCCGCGGCGGTGGTGTACTCGGTG
GGCACTCATCGCTCAGCAACGGCAGACCCGGTCCGGTTGGTTCTAGCCGGTGTGGCCCTGAGTGCGATTCTTTCCGGAAT
CGGCGAGGGACTCTCTCTGGTTAACCCCCAGGCCTTTGACCGGTTAAAGAGCTGGATGGTGGGAAGCGTGGACGTCGGCA
CGCTTACGCCTCTAGGCATCGCTGGCGCTGGTCTTGCGTGCGGCGTTGTTCTCACGATCACGTGCGCTCATGGGCTTAAT
GCGCTGGCTTTGGGCGACGCCATGGCTACATCCATCGGCGCATCCACCGCGCGCATCCGTTTTATTTCCTTTATCGCTGT
AGTCATCCTCGCGGCCAGCGCTACTGCCGCAGCCGGAGTCATTATCTTCCTTGGACTTATGGTTCCCCACGTTGCGCGAT
GGATCGTGGGACCAGACCTCCCCCGGGTGCTCACCACGTCCCTTCTTCTCGGGCCGCTTGTTCTTGTTGTAGCGGATATT
GTTGGTCGCCTGATCGTTCCCGGTGAGTTTCCCGCGGGAGTGGTTGTGTCCTTTATTGGTGCGCCGTTCCTCATTGCATA
TGCCCAAAGCAGGAAGGGGGAAATGTGA

Protein sequence :
MVSTATSSSNPHRSFFVKHPRNTQRTRRPLIAVVVLLAVLLVAVSVVSVMVGARLIPLPEIINAILHPDPTNVSSTIVWD
RRIPRTLLAIVAGMSLGLAGTLSQALTRNPLADTGALGINSGAAFAIVVGIALFGASSSWVFLALALAGACAAAAVVYSV
GTHRSATADPVRLVLAGVALSAILSGIGEGLSLVNPQAFDRLKSWMVGSVDVGTLTPLGIAGAGLACGVVLTITCAHGLN
ALALGDAMATSIGASTARIRFISFIAVVILAASATAAAGVIIFLGLMVPHVARWIVGPDLPRVLTTSLLLGPLVLVVADI
VGRLIVPGEFPAGVVVSFIGAPFLIAYAQSRKGEM

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 7e-110 90
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 7e-110 90
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 7e-110 90
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 7e-110 90

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fagA1 YP_005709678.1 integral membrane protein VFG0926 Protein 6e-34 46