Gene Information

Name : srtB (CULC809_01953)
Accession : YP_005711574.1
Strain : Corynebacterium ulcerans 809
Genome accession: NC_017317
Putative virulence/resistance : Unknown
Product : putative fimbrial associated sortase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2195832 - 2196719 bp
Length : 888 bp
Strand : +
Note : Sortase (surface protein transpeptidase)

DNA sequence :
ATGGTCAAGCACGCAGATGCTAAAGAAGAACTGGCCCACAAAAAGAAAAAGCAGAGCAAAGGCAACGCTTTCGTCGCACT
TTTGATCATCCTTCTTGGTCTGTGCGTTTTGCTTTATCCCGTCATATCCACGCAGTGGAATAACTATGCCCAATTGAAAG
CTGCCGATGAGTACTCCAAATTGGAAAAATCAACGCCTCCAGAAGTACTAGACACTGCATGGAATGAGGCGCAGGCTTAT
AATGCAGAACGGCTGGTGAGCGACCGCGTTCTTGATGCATGGAACGACACTACTGATGAAAATTCCCCTGCCTATCAACG
CTATCGCAGTTATCTCTCCCAACTCGCTGAAACCGATGCTATGGGCCGCATACTTATCCCATCCATCGGTTCTGATTTAC
CCATTTATCATGGCACGGGGGAACGCTCTTTAAGCCGTGGCGTCGGCCATCTGTACGGAACCGACTTACCAGTGGGAGGC
GTCGATCGGCACTCTGTGCTTTCTGCGCATACCGGACTACAGAACGCTACGTTGTGGGACAACCTGAACAAGGTCAAAGA
AGGCGATGCCTTCTATATCGCCGCGGCCGGACACAAACTTAAGTATCAAGTTGATCGCATAAGTGTGGTCCTGCCTGAGG
AGACAGATGCGCTCCAAAGGGTTGAAGGGCAAGACCTCATCACTTTGGTCACGTGTACACCATACGGAATCAACACACAT
CGTCTTCTCGTGCAAGGCCATCAAGTCCCCATGGATCCGCAGGAAGAAAAAGTGTTTGAAGAAGGCTCGGGAATGAACAT
GCAGTGGTGGATGTGGGCAATTCTTGCGGCTGCCGTTCTCACTATTGTTTTGCTCATCGTTTGGTGGCGCAAAAACTTTA
GCAAGTAA

Protein sequence :
MVKHADAKEELAHKKKKQSKGNAFVALLIILLGLCVLLYPVISTQWNNYAQLKAADEYSKLEKSTPPEVLDTAWNEAQAY
NAERLVSDRVLDAWNDTTDENSPAYQRYRSYLSQLAETDAMGRILIPSIGSDLPIYHGTGERSLSRGVGHLYGTDLPVGG
VDRHSVLSAHTGLQNATLWDNLNKVKEGDAFYIAAAGHKLKYQVDRISVVLPEETDALQRVEGQDLITLVTCTPYGINTH
RLLVQGHQVPMDPQEEKVFEEGSGMNMQWWMWAILAAAVLTIVLLIVWWRKNFSK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
srtC YP_005137206.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-81 72
srtB YP_005137208.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 9e-64 60
DIP0233 NP_938624.1 fimbrial associated sortase-like protein Not tested Not named Protein 2e-65 60
DIP0236 NP_938627.1 fimbrial associated sortase-like protein Not tested Not named Protein 4e-61 54
srtC1 YP_005141811.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 4e-49 47
DIP2012 NP_940343.1 fimbrial associated sortase-like protein Not tested Not named Protein 9e-44 45
srtH YP_005139151.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 1e-34 45
srtH YP_005126713.1 putative fimbrial associated sortase-like protein Not tested Not named Protein 5e-34 42