Gene Information

Name : sgbU (OG1RF_10908)
Accession : YP_005707965.1
Strain : Enterococcus faecalis OG1RF
Genome accession: NC_017316
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 3-epimerase
Function : -
COG functional category : -
COG ID : -
EC number : 5.1.3.22
Position : 951333 - 952193 bp
Length : 861 bp
Strand : +
Note : COG: COG3623; Pfam: PF01261; InterPro: IPR004560

DNA sequence :
ATGGCACGAATTGGACTGTATGAAAAAGCACTCCCGCAAAATTTAACTTGGGCGGAACGATTAACATGGGCCAAAAAGTT
AGGATTTGATTTTTTAGAAATGTCAATTGATGAATCCGATGAACGTTTAGCACGATTGGCTTGGACACCAAGCCAGTTAC
AAGAACTTTCTCAATTAATGGTGAAAGAAGATTTTTTTATCCATTCTTTGTGTTTAAGTGGTCATCGGCGGTTCCCTTTA
GGCTCTTTAAATAAAGAAACACGTGAAAAAGGGCGGAAAATTTTATCTCAAGCGATTCGTTTGGCTCATCAATTAAACAT
ACGGGTAATTCAAATAGCTGGCTATGACGTCTTTTACGAAGAAAAAACTGCCGAAACAAGGGAATTTTTTCTTCAAGGTC
TGAAAAAGGGCGTTGAGGAAGCTGCACAATACGGTGTCATTCTGGCTGTTGAGATTATGGATGACCCTTTTATGAATAGC
ATACAAAAATTTCTAGAAATTAAGGAACAAATTCCGTCTCCTTTTTTGCATGTTTATCCTGATTTAGGTAATTTGTCTGC
TTGGCCGGAAAATAATCCGGCGGTTGAGCTTGAAAAGGGAATTGCTGAAATCGCTGCTATTCACTTAAAAGATACCTTCG
CTGTAACAGACACATTTGAAGGGAAGTTTCGGGAAGTTACTTTTGGAGAAGGCTGTGTTGATTTTACAGGCTTATTAAAA
ACACTCAAGCGGTTAAACTATAGTGGTCCTTTTTTAATTGAAATGTGGAATGAAACGGATTTGAATTTTCAAGAAAAAAT
TCAAGCCGCGCAGCAGTATCTCTATCCCAAATTAGCAGAGGTGGGTTATTATGAACAATAA

Protein sequence :
MARIGLYEKALPQNLTWAERLTWAKKLGFDFLEMSIDESDERLARLAWTPSQLQELSQLMVKEDFFIHSLCLSGHRRFPL
GSLNKETREKGRKILSQAIRLAHQLNIRVIQIAGYDVFYEEKTAETREFFLQGLKKGVEEAAQYGVILAVEIMDDPFMNS
IQKFLEIKEQIPSPFLHVYPDLGNLSAWPENNPAVELEKGIAEIAAIHLKDTFAVTDTFEGKFREVTFGEGCVDFTGLLK
TLKRLNYSGPFLIEMWNETDLNFQEKIQAAQQYLYPKLAEVGYYEQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 2e-66 52