Gene Information

Name : clpE (OG1RF_10444)
Accession : YP_005707501.1
Strain : Enterococcus faecalis OG1RF
Genome accession: NC_017316
Putative virulence/resistance : Virulence
Product : ATP-dependent Clp protease
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 458590 - 460830 bp
Length : 2241 bp
Strand : -
Note : COG: COG0542; Pfam: PF00004,PF02151,PF07724; InterPro: IPR003593

DNA sequence :
ATGATTTGTCAAAATTGTCAACAAAATGAAGCAACAATTCATTTATATGCAAATGTGAATGGTCAAAGAAAACAACTGGA
CTATTGCCAAAGCTGCTATCAAAAATTAAAAAATCAAGCAAATAATTCCCCTCAAAATATGGGACAAGACCCTTTTGGCT
TTGGGAGTTTAGACGATTTATATCGTTCTCTTTCTCGCCAAATGCAACAAGGTAATCCTTATGAACAACAAACACCACCC
ACTCAATTTGGTGATGGTGGTAATGGAGGTCAACCCCCTCGCGGAGGCGCTGGCGCTGGTCAAGGTTTACTAGGCGAGTA
TGGGATTAACATCACCGAAGCGGCACGCCAAGGAGATATCGATCCTGTGGTAGGACGTGATCAAGAAATTAAGCGTGTCA
TTGAAATCTTAAATCGCCGTACAAAAAACAACCCCGTTTTAATCGGTGAACCAGGTGTTGGTAAAACAGCCGTTGTCGAA
GGTTTAGCCCAAAAAATTGTCGATGGCGATGTGCCCCAAAAATTATTGGACAAAGAAGTCATTCGTTTAGATGTGGTTTC
ACTTGTTCAAGGAACTGGTATTCGCGGACAATTTGAAGAACGGATGCAAAAATTGATTGAAGAAATCACTGAAGCTGAAA
ATGTCATTTTATTTATTGATGAAGTCCATGAAATTGTGGGTGCTGGTGCTGCTGGTGATGGCAATATGGATGCTGGCAAT
ATTTTAAAACCAGCCTTAGCACGTGGTGAATTACAATTAGTCGGTGCCACAACTTTAAATGAGTACCGTATTATTGAAAA
AGATGCTGCCTTAGAACGTCGGATGCAACCAGTCCAAGTAGATGAGCCAACCGTTGCCGAAACCATAACGATTTTACATG
GTTTGCAAAAACGTTATGAAGATTATCATCATGTTAAATATACAGATGAAGCGATTAACGCAGCAGCAAACTTATCCAAT
CGTTACATTCAAGATCGCTTTTTACCAGATAAAGCGATTGACTTGTTAGATGAATCTGGTTCAAAAATGAATCTAACTAT
CCAACTCGTCGATCCAAAAACAATTGATAAAAAATTAGCAGAAGCGGAACAACAAAAACAACAAGCTTCCGCAGAAGAAG
ATTTTGAAAAAGCGGCTTATTATCGTGATCAAATCAATAAATTACAAGCAATGAAAGAAAAACAAATCAGCGATGAAGAA
ACACCCGTCATCACTGAAAAAGATATTGAAGCCATTGTGGAACAAAAAACTGGCATTCCTGTCGGTGACTTAAAAGAAAA
AGAACAAACCCAATTGAAAAATTTAGCTGTTGACTTAAAAGCTCATGTTGTCGGACAAGATGATGCCGTCGATAAAGTAG
CTAAAGCGATTCGTCGCAATCGTGTAGGCCTAGGCAAACAAAACCGCCCAATTGGTTCCTTCTTATTTGTTGGGCCAACA
GGCGTTGGTAAAACAGAATTAGCAAAACAATTAGCTTTTGAGCTATTCGGTTCAGAAGATTCGATGGTTCGTTTTGATAT
GAGTGAGTATATGGAAAAACACAGTGTTTCTAAACTGATTGGTTCTCCTCCAGGCTATGTTGGTTATGACGAAGCTGGAC
AACTCACAGAAAAAGTCCGTCGTAATCCTTATAGTTTAATTTTATTGGATGAAATTGAAAAAGCGCATCCTGATGTTTTA
CACATGTTTTTACAAATTCTCGACGATGGTCGTTTAACAGATGCACAAGGTCGTACAGTCAGCTTTAAAGACACCATCAT
TATCATGACAAGTAATGCTGGAACAGGAGCTGTGGAAGCCAACGTTGGCTTTGGCGCTGCCCGTGAAGGTGTGACTAAAT
CCGTTTTAGGTCAATTGAACAACTTCTTCACCCCCGAATTCCTTAACCGTTTCGATGGTATTATCGAATTCAAAGCATTA
AGCAAAGAAAACCTGATGAACATTGTCAGCTTGATGTTAGAAGAAGTAAATAGCTTATTAGCTAAACAAAAATTACACAT
TGAGGTTCCAACAGAAGTCAAAGAGAAACTCGTTGATTTAGGTTATGATCCTGCAATGGGCGCTCGTCCTTTACGTCGAA
CAATTCAAGAACAAATTGAAGACGGCATTGCTGAATACTATCTAGATCATCCTGAAAATCATCAATTAGTCGCAGCGTTA
GATAACGAAGGTAAAATTATCGTAACTGGCGCACAAGAAGTGACTAAAACAGAAACTTCAACATCTGACCAAGCAGAATA
A

Protein sequence :
MICQNCQQNEATIHLYANVNGQRKQLDYCQSCYQKLKNQANNSPQNMGQDPFGFGSLDDLYRSLSRQMQQGNPYEQQTPP
TQFGDGGNGGQPPRGGAGAGQGLLGEYGINITEAARQGDIDPVVGRDQEIKRVIEILNRRTKNNPVLIGEPGVGKTAVVE
GLAQKIVDGDVPQKLLDKEVIRLDVVSLVQGTGIRGQFEERMQKLIEEITEAENVILFIDEVHEIVGAGAAGDGNMDAGN
ILKPALARGELQLVGATTLNEYRIIEKDAALERRMQPVQVDEPTVAETITILHGLQKRYEDYHHVKYTDEAINAAANLSN
RYIQDRFLPDKAIDLLDESGSKMNLTIQLVDPKTIDKKLAEAEQQKQQASAEEDFEKAAYYRDQINKLQAMKEKQISDEE
TPVITEKDIEAIVEQKTGIPVGDLKEKEQTQLKNLAVDLKAHVVGQDDAVDKVAKAIRRNRVGLGKQNRPIGSFLFVGPT
GVGKTELAKQLAFELFGSEDSMVRFDMSEYMEKHSVSKLIGSPPGYVGYDEAGQLTEKVRRNPYSLILLDEIEKAHPDVL
HMFLQILDDGRLTDAQGRTVSFKDTIIIMTSNAGTGAVEANVGFGAAREGVTKSVLGQLNNFFTPEFLNRFDGIIEFKAL
SKENLMNIVSLMLEEVNSLLAKQKLHIEVPTEVKEKLVDLGYDPAMGARPLRRTIQEQIEDGIAEYYLDHPENHQLVAAL
DNEGKIIVTGAQEVTKTETSTSDQAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 2e-144 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
clpE YP_005707501.1 ATP-dependent Clp protease VFG0080 Protein 0.0 61
clpE YP_005707501.1 ATP-dependent Clp protease VFG0079 Protein 2e-149 53