Gene Information

Name : Deval_0079 (Deval_0079)
Accession : YP_005700888.1
Strain : Desulfovibrio vulgaris RCH1
Genome accession: NC_017310
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 97994 - 98725 bp
Length : 732 bp
Strand : -
Note : PFAM: alanine racemase domain protein; KEGG: dde:Dde_3590 hypothetical protein

DNA sequence :
ATGATGGAACATGCACAGATGAACACGCCCCTCGCTGAACGTTATGCCGCCGTGCGGCACAGGCTGGAAACGGCGGTACG
CCGCGCCGGACGCGCCCCTGCCGACGTCACGCTGGTGGCCGTCTCCAAGTACCATCCGGCAGAGGCCGTGGCTGCCGTCG
CCGCCCTCGGACAACGCGACTTCGGCGAGAATTACGTGCAGGAGGCCTTGCAGAAGCAGGAGGCCCTCGCCGGAGAGGAC
ATCCTCTGGCACTGCATCGGGCACGTGCAAAGCCGCAAGGCGAAAGATGTGGCAGGGCGCTTCGCCCTCATCCACACCGT
GGACTCGGAGAAGCTGGCGCACAACTTGCATAAGGCACTGTGGCGTCCGGAAGACGACACGTGTCCCGTCGTGCAGGATG
TGCTCTTGCAGGTGAACATCGGTGAAGAAGTCCAGAAGTCGGGCATCGACGCCGCCGAAACGGCACGCCTCGCCGAAACG
GTGCTGCAACTGCCCACCCTGCGCCTGTGCGGACTGATGTGTCTGCCGCCCTTCTTCGACGACGGCGAGGCGGCACGACC
GTTCTTCGCGGCGCTACGGAAGCTGCGCGACGACCTTGAGCTTTCCCTCGGAGTGCCCCTGCCGCATCTCTCCATGGGCA
TGTCAGGCGACTTCGAACAGGCCGTGGAGGAAGGGGCGACCATCGTGCGTGTGGGCACGGACATCTTCGGCCCCCGTCCG
CCCAGACCCTGA

Protein sequence :
MMEHAQMNTPLAERYAAVRHRLETAVRRAGRAPADVTLVAVSKYHPAEAVAAVAALGQRDFGENYVQEALQKQEALAGED
ILWHCIGHVQSRKAKDVAGRFALIHTVDSEKLAHNLHKALWRPEDDTCPVVQDVLLQVNIGEEVQKSGIDAAETARLAET
VLQLPTLRLCGLMCLPPFFDDGEAARPFFAALRKLRDDLELSLGVPLPHLSMGMSGDFEQAVEEGATIVRVGTDIFGPRP
PRP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cpfrc_01564 YP_003783964.1 hypothetical protein Not tested PiCp 6 Protein 3e-27 41
CpI19_1562 YP_005686005.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-27 41
Cp1002_1555 YP_005681817.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-27 41
CpC231_1557 YP_005683917.1 Pyridoxal phosphate enzyme, YggS family Not tested PiCp 6 Protein 3e-27 41