Gene Information

Name : Deval_3071 (Deval_3071)
Accession : YP_005703850.1
Strain : Desulfovibrio vulgaris RCH1
Genome accession: NC_017310
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3504467 - 3505177 bp
Length : 711 bp
Strand : +
Note : KEGG: dds:Ddes_2106 ABC transporter related; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGCCGTCCGCCAACACCGCCGACCCGAATCTCAAAAACGGAGACATGATGCTCGAAGCCCGCCATATCACCAAAAGCCA
TCCCGGTGCGCACAGTCCGGTACTGTATGACACCAGCCTCTCCGTGGCGGAAGGGGAGTTCATCGCCGTCGTCGGCAGGT
CGGGTTCGGGCAAGAGCACGCTCCTCAACGTGCTGGCGTCATTGAGCCTGCCCGACAGCGGGCATGTGCTCTACGAAGGC
GAAGACATCACCACCGCCACGGAAGCCCGCCGCAACGCATTGCGTCACAGGGACTTCGCCGTCATCTTCCAGCAGCACCA
CCTCATGCCCTATCTCAGCGCCCTTGAGAACGTGCTGCTGCCCTTCATGGCGAGCCTCACGCCCATCCCGGCACCGTTGC
GCGACAAGGGACGCGACGTGCTGACGCGCGTGGGATTGGCGGGCCGTGCTGACGCACTGCCGGGGCAACTTTCGGGGGGT
GAACAGCAACGGGTGGCCATCGCCCGCGCCCTCGTCCGTGACGCCCGCATCCTGTTCGCCGACGAACCCACGGGCAGCCT
CGACTCCGCAACCGGTGACGACGTGATGCAGCTTTTGCAGACACTGAACGGGGGAGGGCTGACCATCGTCATGGTCACAC
ACAACGCCGAATATGCCAGCCTCGCGCACCGCACGCTGCATATGGCCGACGGCTGCCTTCGCCCTGCCTGA

Protein sequence : 
MPSANTADPNLKNGDMMLEARHITKSHPGAHSPVLYDTSLSVAEGEFIAVVGRSGSGKSTLLNVLASLSLPDSGHVLYEG
EDITTATEARRNALRHRDFAVIFQQHHLMPYLSALENVLLPFMASLTPIPAPLRDKGRDVLTRVGLAGRADALPGQLSGG
EQQRVAIARALVRDARILFADEPTGSLDSATGDDVMQLLQTLNGGGLTIVMVTHNAEYASLAHRTLHMADGCLRPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 5e-31 48
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 1e-31 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 1e-31 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deval_3071 YP_005703850.1 ABC transporter NC_008702.1.4606598. Protein 2e-26 47
Deval_3071 YP_005703850.1 ABC transporter NC_012469.1.7686878. Protein 6e-32 44
Deval_3071 YP_005703850.1 ABC transporter CP001581.1.gene598.p Protein 1e-27 41