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Name : Deval_2685 (Deval_2685) Accession : YP_005703465.1 Strain : Desulfovibrio vulgaris RCH1 Genome accession: NC_017310 Putative virulence/resistance : Unknown Product : DNA-directed DNA polymerase Function : - COG functional category : - COG ID : - EC number : 2.7.7.7 Position : 3010713 - 3012200 bp Length : 1488 bp Strand : - Note : KEGG: dma:DMR_28930 UmuC protein; PFAM: UMUC domain protein DNA-repair protein DNA sequence : ATGGCGCACGCCCAGCGGGGCGTCTCCGGTATTGCGGGGAGTGCCGGTGTGAGCACTTCTGAAGCACTCAAACCACCTGC TGCAGTGCATGGGCCGCCTGAATCACAAGAGCCATGCGGAACCTTCGGGCCAGACGAGACCACAGGGGCAACCTCGACGG CCGCATCACGCGGGGAGGCCCGACGCCTGCCGCGGGGGGGCGTCCTGTGGGCGCTGGTGGACTGCAACAACTTCTACGCC TCGTGCGAACGGCTTTTCAGGCCCGACCTCAAGGGGCGTCCGGTCGTGGTGCTTTCCAACAACGACGGCTGTGTCATCGC GCGTTCCGCCGAAGCCAAGGCACTCGGCGTGCCCATGGGGGCACCGGAGTTCAAGGTGCGCGACATGCTGCGTGCCCACG ACGTGGCTGTGTTCTCGTCCAATTACGCCCTGTACGGCGACCTCTCGCAACGGGTCATGCGCACACTGGCGACGGTGGTG CCCCGGGTCGAGGTCTATTCCATCGACGAGGCGTTCATCCCGTTGCCTGCGGCACTTGCCGCCGACCCCGTAGCTGTGGG GCGCACCCTGCGGCAGCGCGTGGCGCAATGGGTGGGCATTCCCGTGTCGGTGGGCGTCGGCCCCACGCGGACCCTCGCCA AGCTTGCCAACAGGCTTTCCAAGCAGGACTCCGCGTATGGGAATGTCTTCGACCTGACCCCGGAGACGGTGGACATGGAC AGGGTACTCGCCAGCGTGGATGTGGGCGATGTGTGGGGCGTGGGGCGCCGGAGTGCGGAGATGCTGCGGGGGCGTGGCAT TCTCACCGCGCGGGCGCTGCGCGACGCAGACCCCCTGTGGGTGCGGCAGCGCATGACCGTCACGGGCTGGCGCACGCAGC AGGAGTTGCGGGGAATGCCGTGCCTCACGGATGACGACCTGCCCGTGCCGCGTCGTTCCATCCGCTCATCCCGTTCGTTC GGTCAGATGGTGCGCACCTTGGAGCCCCTGCGGGAGGCGGTCGCCACGTTCACCGCACGGGCGGTGGCCAAGGCGCGCGC CGAAGGGCTTGTGGCGTCGTGCATCGAGGTGCATATCCGCACGCCGCGGCACACCGAACGACCACGTTACGACGAGACGA CGACCATCACCCTGCCTTGCCCCACGGCGGACACGGGCCTGTGCATACGACACGCCCTCACGGGGCTGGAGCGCATCTTC CGTGAGGGCTATCTCTACGCCAAGGCGGGGGTCACGCTGTTCGGACTCGAACCGGCTGCGGGGCGGCAGGGGAGCCTTCT CGACCTCCTCGACGGTTCGCACGAGCACAAGGCGCGACGCGAACGACTCATGGCCGCGCTGGATGCCGTCAACCTACGGC ACGGGCGCGGGAGTATCCGCCACGGTGCGGAAGGCGACCCCGGTGCCGCGTGGCATATGAGCCAGAAGTACCGTTCGCCG CGCTACACCACGGCATGGGAGGAACTGCCCGAAGTGCTCTGCCGTTGA Protein sequence : MAHAQRGVSGIAGSAGVSTSEALKPPAAVHGPPESQEPCGTFGPDETTGATSTAASRGEARRLPRGGVLWALVDCNNFYA SCERLFRPDLKGRPVVVLSNNDGCVIARSAEAKALGVPMGAPEFKVRDMLRAHDVAVFSSNYALYGDLSQRVMRTLATVV PRVEVYSIDEAFIPLPAALAADPVAVGRTLRQRVAQWVGIPVSVGVGPTRTLAKLANRLSKQDSAYGNVFDLTPETVDMD RVLASVDVGDVWGVGRRSAEMLRGRGILTARALRDADPLWVRQRMTVTGWRTQQELRGMPCLTDDDLPVPRRSIRSSRSF GQMVRTLEPLREAVATFTARAVAKARAEGLVASCIEVHIRTPRHTERPRYDETTTITLPCPTADTGLCIRHALTGLERIF REGYLYAKAGVTLFGLEPAAGRQGSLLDLLDGSHEHKARRERLMAALDAVNLRHGRGSIRHGAEGDPGAAWHMSQKYRSP RYTTAWEELPEVLCR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 7e-62 | 43 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 3e-57 | 42 |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 3e-57 | 42 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 2e-46 | 42 |
