Gene Information

Name : Deval_2390 (Deval_2390)
Accession : YP_005703172.1
Strain : Desulfovibrio vulgaris RCH1
Genome accession: NC_017310
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2715533 - 2716213 bp
Length : 681 bp
Strand : -
Note : KEGG: rce:RC1_0686 two-component transcriptional regulator, putative; PFAM: response regulator receiver; transcriptional regulator domain-containing protein; SMART: response regulator receiver

DNA sequence : 
ATGAACATACTCATCGTCGAAGACGACGCCACCATAGCCGCGACGACGGCGCAGGCGCTTGTGGACGCGGGAAACGAGGC
GATGGTGGCCTCCACGCTGGATGAAGCCAGAGAGAAGGCGGGCAGCGGGGCGTGGGACGCCATCGTTCTCGACCTCATGC
TGCCGGATGGTGATGGTGCCGACCTGCTGCACGAATTGCGTGAGCGGGGCGACACCGTGCCTGTTCTGGTGCTCAGCGCC
CGTCAATCCGTAGAGGACAGGGTGCGGCATCTCGAAAGCGGCAGTGACGACTATCTCACCAAGCCCTTCGCCATCTCCGA
GTTGCTGGCGCGGCTTGCGGCGTTGCGCCGTCGCAGTGCGGGCAGGCCCATGTCGCTCACCCATTCGGGGCTCATGCTCG
ACCTCGTGCACCGCAAGGCCTATCGCGACGGGTGCGAGATGGACCTCAAGGGGCGAGAGTTCGCGCTGCTGCTGTTGCTC
ATGGAGAACGCGGGCACGGTGGTCACCCGTAACATGATCGTGAAGCGGGTGTGGGGCTATGACTTCATGCCCGGTTCCAA
CATCATCGACGTGCAGATATGCCAGCTTCGCGAGAAGACGGAGCGCAACGGCGCCCCGAGGGTCATTCATACCATGCGCG
GCGTGGGTTATGTCTTCGGACTCGCAGACGCCGTGGCATAG

Protein sequence : 
MNILIVEDDATIAATTAQALVDAGNEAMVASTLDEAREKAGSGAWDAIVLDLMLPDGDGADLLHELRERGDTVPVLVLSA
RQSVEDRVRHLESGSDDYLTKPFAISELLARLAALRRRSAGRPMSLTHSGLMLDLVHRKAYRDGCEMDLKGREFALLLLL
MENAGTVVTRNMIVKRVWGYDFMPGSNIIDVQICQLREKTERNGAPRVIHTMRGVGYVFGLADAVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 2e-24 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deval_2390 YP_005703172.1 winged helix family two component transcriptional regulator BAC0197 Protein 7e-30 41
Deval_2390 YP_005703172.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-29 41
Deval_2390 YP_005703172.1 winged helix family two component transcriptional regulator BAC0638 Protein 3e-25 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deval_2390 YP_005703172.1 winged helix family two component transcriptional regulator VFG1390 Protein 1e-30 44
Deval_2390 YP_005703172.1 winged helix family two component transcriptional regulator VFG0596 Protein 6e-25 44
Deval_2390 YP_005703172.1 winged helix family two component transcriptional regulator VFG1389 Protein 9e-29 43