|
Name : Deval_2334 (Deval_2334) Accession : YP_005703116.1 Strain : Desulfovibrio vulgaris RCH1 Genome accession: NC_017310 Putative virulence/resistance : Unknown Product : transketolase Function : - COG functional category : - COG ID : - EC number : - Position : 2644431 - 2646425 bp Length : 1995 bp Strand : - Note : KEGG: dde:Dde_2631 transketolase; TIGRFAM: transketolase; PFAM: Transketolase domain-containing protein; Transketolase central region DNA sequence : ATGCCGTCTCGCAAGGATTTTGCCAATGCCATTCGCGTCCTGAGCATGGATGCGGTCGAAAAGGCCAAGTCGGGGCACCC CGGTGCACCCATGGGTATGGCCAACATCGCCGAAGCCCTCTGGAGAGGGCCGCTGCGCCACAACCCCGCCAACCCGCACT GGCCCGACCGTGACCGTTTCGTGCTCTCCAACGGGCACGGTTCCATGCTCATCTACGCGCTGCTGCATCTCACCGGCTAT GCCGTGAGCATGGACGACATCCGTGATTTTCGCCAGATGGGCTCGCGTACGCCGGGACACCCCGAGTACGGCATCACCCC CGGGGTCGAGACCACCACCGGCCCCCTCGGGCAGGGCATCGCCACCGCCGTGGGTATGGCCATGGCCGAGCGTATGCTCG CCACCGGGTTCAACCGTGACGGCTTCCCCGTGGTCGACCACCACACCTATGTGTTCCTTGGTGACGGCTGCATGATGGAA GGCATCTCGCACGAGGCATGCTCCCTTGCGGGCACGCTGGGCCTCGGCAAGCTCATCGCCTTCTACGATGACAACGGCAT CTCCATCGATGGCGAGGTCAAGGGCTGGTTCGCCGACGACACCCCCGCCCGCTTCGAAGCCTACGGCTGGCATGTGGTAC GCGATGTTGATGGCCACGATGCTGCGGCCCTCGATGCCGCCCTCGCCGCCGCGCGTGCGCAGACCGGCAAGCCCAGCCTC ATCTGCTGCAAGACCTGCATCGGCAGTGGTGCCCCCAACAAGTGCGGCAGCCACGACTGCCACGGTTCGCCTCTGGGCGA GGCCGAGATTGCCGCCGCCCGCGAGGCCATGAACTGGCCGCACCCGCCGTTCGAGATTCCCGCCGACATCTATGCCGCGT GGGATTGCCGCGACAAGGGTGCCAAGGACGAAGCCGCATGGCGTGAGATGTTCGAGGGCTACCGCAAGGCGTACCCCGAC CTTGCCGCCGCATTCGAACGCCGCATGTCCGGTGAACTTCCCGCCAACTGGGAAGCCGAGGTCGAAGCCTGCATCGCCGC CACCGACAGCGCCGCAGAGAAGCTGGCGACGCGTGTGGCTTCGCGCAACGCCCTCAACGGCATCGCGCCGCTGCTGCCTG AACTCGTGGGCGGTTCCGCCGACCTCACCGGTTCGGTGGGCACATGGCACAAGGGGTCGGTTCGCCTCACCCCCGACAAC TGGGACGCCAACTACATCTCCTACGGGGTGCGCGAGTTCGCCATGGGGGCCATCATGAACGGCCTCACCCTGCATGGCGG CTTCATCCCCTACGCCGGCACCTTCCTCATCTTCTCCGACTACGCCAAGAACGCCATCCGCCTTTCGGCCCTGATGGGCA TCCGCGTGGTGTGGGTGCTGACCCACGACTCCATCGGCGTGGGCGAGGACGGCCCCACCCACCAGCCTGTCGAACAGCTG GGCGGGCTGCGGCTCATTCCCAACGTCTCGGTATGGCGTCCGTGCGACACGGTCGAGACCGTGGCCGCTTGGAAGAGTGC CATCGAATGCGCCACCGGCCCCACATGCATCTCCCTCACCCGTCAGGGTGTGCCGCACATCGCCCGCACAGCCGAACAGC GTGCGGCCATCGGGCGCGGCGGCTACATCCTGCGCGACTGCGCGGGCAAGCCCGAAGCCATCATCATGGCTACGGGGTCT GAAGTGCAACTGGCTGTCGAGGCCGCTGCCGAACTTGAGAAGCGTGGTCGCCGCGTGCGCGTCGTTTCCATGCCTTCGTC TTCCGTCTTCGACCGGCAGGATGCCGCCTACCGTGAGAGCGTCCTGCCCTCCGACGTGCGCGTGCGCGTGGCCGTGGAGG CCGCCGCGTCCGACGCATGGTGGAAGTATGTGGGTCTCGACGGCAAGGTGGTCGGCATGACCGGTTTCGGCGAGTCCGCA CCCGGCGGTGTCCTGTTCAAGCATTTCGGCTTCACCGTGGACAACGTGGTGGATACCGTCACGTCGCTTCTCTAG Protein sequence : MPSRKDFANAIRVLSMDAVEKAKSGHPGAPMGMANIAEALWRGPLRHNPANPHWPDRDRFVLSNGHGSMLIYALLHLTGY AVSMDDIRDFRQMGSRTPGHPEYGITPGVETTTGPLGQGIATAVGMAMAERMLATGFNRDGFPVVDHHTYVFLGDGCMME GISHEACSLAGTLGLGKLIAFYDDNGISIDGEVKGWFADDTPARFEAYGWHVVRDVDGHDAAALDAALAAARAQTGKPSL ICCKTCIGSGAPNKCGSHDCHGSPLGEAEIAAAREAMNWPHPPFEIPADIYAAWDCRDKGAKDEAAWREMFEGYRKAYPD LAAAFERRMSGELPANWEAEVEACIAATDSAAEKLATRVASRNALNGIAPLLPELVGGSADLTGSVGTWHKGSVRLTPDN WDANYISYGVREFAMGAIMNGLTLHGGFIPYAGTFLIFSDYAKNAIRLSALMGIRVVWVLTHDSIGVGEDGPTHQPVEQL GGLRLIPNVSVWRPCDTVETVAAWKSAIECATGPTCISLTRQGVPHIARTAEQRAAIGRGGYILRDCAGKPEAIIMATGS EVQLAVEAAAELEKRGRRVRVVSMPSSSVFDRQDAAYRESVLPSDVRVRVAVEAAASDAWWKYVGLDGKVVGMTGFGESA PGGVLFKHFGFTVDNVVDTVTSLL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| tktA | AAO17218.1 | TktA | Not tested | tcd island | Protein | 0.0 | 65 |
| APECO1_2641 | YP_859417.1 | transketolase | Not tested | Not named | Protein | 0.0 | 65 |
