Gene Information

Name : Deval_1886 (Deval_1886)
Accession : YP_005702675.1
Strain : Desulfovibrio vulgaris RCH1
Genome accession: NC_017310
Putative virulence/resistance : Unknown
Product : transposase IS3/IS911 family protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2114959 - 2115357 bp
Length : 399 bp
Strand : +
Note : KEGG: nmu:Nmul_A2173 transposase IS3/IS911; manually curated; PFAM: transposase IS3/IS911 family protein

DNA sequence :
ATGTCCAGACAGAGTGCTAAAGAGATTTCCACGGTCGAGGTCGTGACCATGGTTCAACGTCGTCGTTGGACCATTGCCGA
GAAGCTACGGGTAGTTGAAGAGTCGTCTTTACCCGGAATGAGCGTCTCCTTCGTGGCTCGCAAATACGGCATCGCTCCGA
ATCTTGTCTTTCGATGGAGAAAGCTCATGAGCGATGGCGGAAAAGTGGCTATTCAGGCCGACGACCGAGTGGTGAGCGTG
GCAGAGGCGAAGGCTTTGAAGAAGCGCATTCGGGATTTGGAACGGCTTCTCGGCCGAAAGACGATGGAAGTCGAAATCCT
GAAGGAAGCTATCGACATTGCACGCGAAAAAAAACTGATCTCGCGTTCGCCGTTGCCATTCGAGGACGGTTCCCTATGA

Protein sequence :
MSRQSAKEISTVEVVTMVQRRRWTIAEKLRVVEESSLPGMSVSFVARKYGIAPNLVFRWRKLMSDGGKVAIQADDRVVSV
AEAKALKKRIRDLERLLGRKTMEVEILKEAIDIAREKKLISRSPLPFEDGSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAL57520.1 IS2 transposase Not tested LEE Protein 2e-21 46
st02 CAC81840.1 ST02 protein Not tested LEE II Protein 2e-21 46
ECO26_5247 YP_003232129.1 insertion sequence 2 OrfA protein Not tested LEE Protein 3e-21 46
S3188 NP_838471.2 insertion sequence 2 OrfA protein Not tested SHI-1 Protein 3e-21 46
S4060 NP_839229.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 3e-21 46
tnpG AAD44740.1 TnpG Not tested SHI-2 Protein 2e-21 46
S4049 NP_839217.2 insertion sequence 2 OrfA protein Not tested SHI-2 Protein 1e-20 45
aec50 AAW51733.1 Aec50 Not tested AGI-3 Protein 4e-21 45
SF2984 NP_708758.3 IS2 ORF1 Not tested SHI-1 Protein 4e-21 44
SF3722 NP_709461.3 IS2 ORF1 Not tested SHI-2 Protein 1e-20 43
SF3709 NP_709448.3 IS2 ORF1 Not tested SHI-2 Protein 1e-20 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deval_1886 YP_005702675.1 transposase IS3/IS911 family protein VFG0648 Protein 1e-21 44
Deval_1886 YP_005702675.1 transposase IS3/IS911 family protein VFG0622 Protein 3e-21 43
Deval_1886 YP_005702675.1 transposase IS3/IS911 family protein VFG0609 Protein 3e-21 43