Gene Information

Name : Deval_1433 (Deval_1433)
Accession : YP_005702227.1
Strain : Desulfovibrio vulgaris RCH1
Genome accession: NC_017310
Putative virulence/resistance : Virulence
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1639750 - 1642347 bp
Length : 2598 bp
Strand : +
Note : TIGRFAM: ATP-dependent chaperone ClpB; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; Clp domain protein; Clp ATPase-like; KEGG: dde:Dde_1661 ATPase; SMART: AAA ATPase

DNA sequence :
ATGGATATCGGAAAGTTCACCGAGAAGTCACAGCAGGCACTGGCAGAGGCCCAGAACATCGCCGTCCGCTTCGGTCATCA
GGAAGTGGATGCCGAACACCTTGCCGACGCCCTCGTCAGGCAGGAGCAGGGGCTTGTGCCCAGATTGCTCGACCGCATGG
GGCAGAAGCCCGAAGCCTTTGCCGAGGCGCTCGAGCGCGAACTCGGCAAGCGTCCCGCCGTCAGCGGGCCGGGGGCGGCA
CCGGGGCAGATATTCGTCTCGAAGCGACTCAACGCCGTACTGGTGAAGGCGCAGGACTTCGCGCGGCAGCTGAAGGACGA
ATATGTCAGCGTAGAGCATATCTTCTGTGTGCTTCTCGAAGAACCCGCTTCCACCATCATGGGGCGCATCGCCCGCGAGT
TCTCGCTCAGCCGCGAGAAGGTGCTCGGTGTGCTGGAGGATGTGCGCGGTTCGCAGCGCGTCACGTCCGCCAACCCTGAA
GACACCTACGAGGCGCTTCAGAAGTATGGTCGCGACCTCGTGGAGGAGGCGCGCAAGGGCAAACTCGACCCCGTCATCGG
GCGTGACGCCGAGATTCGCCGGGTCATCCGCATCCTTTCAAGGCGCACCAAGAACAACCCCGTGCTCATCGGCGAGGCTG
GCGTGGGCAAGACGGCCATCGTCGAAGGTCTGGCCCACCGCATCCTCAAGGGCGACGTGCCCGAAGGCCTGAAGGAGCGT
GGCCTGTTCGCGCTGGACATGGGGGCACTCATCGCCGGGGCCAAGTACCGCGGCGAATTCGAGGAACGCCTCAAGGCGGT
GCTCAAGGAGGTCGAGAAGTCCGAGGGCCGCATCATCATGTTCATCGACGAGTTGCACACCATCGTCGGTGCGGGCAAGA
CCGACGGCGCCATGGATGCCAGCAACCTGCTCAAGCCCATGCTGGCGCGGGGCGAGTTGCATTGCATCGGCGCGACCACC
CTCGACGAATACCGCAAGTACATCGAGAAGGACCCGGCCCTTGAACGGCGCTTCCAGCCTGTGCTCGTCGACGAGCCGAC
CATAGAGGACGCCATCTCCATCCTGCGTGGCCTGAAGGAGCGTTTCGAGGTGCACCACGGCGTGCGCATCAGCGACTCGG
CCATCGTCGAAGCGGTGACGCTCTCGCATCGGTACATCACCGACAGGCAACTGCCGGACAAGGCCATCGACCTCATCGAC
GAGGCTGCCGCCCTCATCCGTACCGAGATAGATTCGCTGCCCGCCGACCTTGACGAGGCCAACCGCAAGATCATGCAGCT
TGAGATCGAGCGTGAAGCCTTGCGGCGCGAGACTGATGTCGCCTCTCGAGAACGCCTGGAACGGCTGGAGAACGAACTCG
CCGACCTGCGGGCAGAGCAGACGGCCCTGCTTTCGCAATGGGAGCGCGAGAAGGGTTCCATCGACCACGTGCGGAGCATC
AAGGAGGATATCGAGCGCACCCGTCACGCCATCGAGGAGGCCGAGCGCGCCTACGACCTCAACCGGGCGGCGGAGTTGAA
GTATTCGCGCCTGCTCGAACTCGAGCGGCAACTCGAATCCGCCGAGAAGGGCGGGCATGACGAGACGCGGCTGCTCAAGG
AGGAGGTGCGTCCCGACGACATCGCCGAAATCGTCGCGCGGTGGACGGGTATCCCGGTGACACGCCTGCTCGAATCGGAG
CGCGAGAAGCTGTTGCGCCTAGCCGATGTGCTGCATGAGCGCGTGGTCGGGCAGGAAGAGGCCGTAGACGCCGTATCCGA
AGCTGTGCTTCGTGCACGTGCCGGGCTCTCAGACCCTTCGCGGCCCATCGGTTCGTTCATTTTCCTTGGCCCCACGGGCG
TCGGCAAGACTGAGCTTTGCAAGACCCTGGCGGAGGCCCTGTTCGATACCGAAGAGAACATCGTTCGCCTCGACATGAGC
GAGTACATGGAGAAGCACGCGGTGGCGCGGCTCATCGGAGCCCCTCCCGGCTATGTGGGCTACGACGAGGGCGGGCAACT
CACCGAGGCGGTGCGGCGCAAGCCCTACAGCGTGGTGCTGTTCGACGAGGTAGAGAAGGCCCACCCTGATGTGTTCAACA
CCCTTCTCCAGATACTGGACGACGGGCGGCTGACAGACAGCCACGGGCGGACAGTGGACTTTCGCAACACCATCATCATC
ATGACCTCGAACATCGGCTCACCCTACATGCTGGACGGCATCAGCGAAGGGGGCGAGTTCCTTTCCGGCGTTCGTGAGAA
GGTGATGGAGGAGTTGCGCAGGCACTTCCGGCCCGAGTTCCTGAACCGCGTGGATGAGACCGTGCTCTTCAAGCCGTTGC
TGCCCGCCCAGATAGCCCGCATCGTCGAGCTTCTTCTTGGCAGGTTGCGCGGGCGCCTTGCCGAGCGCAAGATCGACATC
CGTCTCGGTGATGTGGCGCGCGACTTCATCGCCAAGGCCGCCTACGACCCCGTGTACGGTGCCCGGCCGTTGCGGCGCTA
CCTGCAACACAACATCGAAACTCCCCTTGCCCGCAAGCTCATCGCCGGTGAATTGCGCGATGGCACGACGGTGGAAGTGG
ACGTGGTCGATGATGCCCTGTCGTTCCGAATCGAATAA

Protein sequence :
MDIGKFTEKSQQALAEAQNIAVRFGHQEVDAEHLADALVRQEQGLVPRLLDRMGQKPEAFAEALERELGKRPAVSGPGAA
PGQIFVSKRLNAVLVKAQDFARQLKDEYVSVEHIFCVLLEEPASTIMGRIAREFSLSREKVLGVLEDVRGSQRVTSANPE
DTYEALQKYGRDLVEEARKGKLDPVIGRDAEIRRVIRILSRRTKNNPVLIGEAGVGKTAIVEGLAHRILKGDVPEGLKER
GLFALDMGALIAGAKYRGEFEERLKAVLKEVEKSEGRIIMFIDELHTIVGAGKTDGAMDASNLLKPMLARGELHCIGATT
LDEYRKYIEKDPALERRFQPVLVDEPTIEDAISILRGLKERFEVHHGVRISDSAIVEAVTLSHRYITDRQLPDKAIDLID
EAAALIRTEIDSLPADLDEANRKIMQLEIEREALRRETDVASRERLERLENELADLRAEQTALLSQWEREKGSIDHVRSI
KEDIERTRHAIEEAERAYDLNRAAELKYSRLLELERQLESAEKGGHDETRLLKEEVRPDDIAEIVARWTGIPVTRLLESE
REKLLRLADVLHERVVGQEEAVDAVSEAVLRARAGLSDPSRPIGSFIFLGPTGVGKTELCKTLAEALFDTEENIVRLDMS
EYMEKHAVARLIGAPPGYVGYDEGGQLTEAVRRKPYSVVLFDEVEKAHPDVFNTLLQILDDGRLTDSHGRTVDFRNTIII
MTSNIGSPYMLDGISEGGEFLSGVREKVMEELRRHFRPEFLNRVDETVLFKPLLPAQIARIVELLLGRLRGRLAERKIDI
RLGDVARDFIAKAAYDPVYGARPLRRYLQHNIETPLARKLIAGELRDGTTVEVDVVDDALSFRIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 1e-96 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deval_1433 YP_005702227.1 ATP-dependent chaperone ClpB VFG2084 Protein 1e-99 43