Gene Information

Name : Deval_1323 (Deval_1323)
Accession : YP_005702117.1
Strain : Desulfovibrio vulgaris RCH1
Genome accession: NC_017310
Putative virulence/resistance : Resistance
Product : transferase hexapeptide repeat containing protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1511152 - 1511796 bp
Length : 645 bp
Strand : +
Note : PFAM: transferase hexapeptide repeat containing protein; KEGG: maq:Maqu_1388 hexapaptide repeat-containing transferase

DNA sequence : 
GTGTCCGACTCTCCATTCAGGAGTCCCTTTGAGGGGATTCCGCTGTCACAGCAGGTAACCAACCCGAACATCAGAGTCGG
GCGTTTCAGCTACTATTCCGGGTACTACCACGGACATGGCTTCGACGACTGCGCCCGCTATCTCGCCCCCGACCGCGATG
ACGTGGACAGACTCGTCATCGGAAGTTTCTGTTCCATCGGCAGCGGTGCAAGCTTCATCATGGCTGGCAATCAGGGGCAT
CAGCTTGAATGGGCGGCGACCTTTCCCTTCTTCTACATGCAGGACGAAGCAGCCTTTTCGGGGGCAGTGGACGGATTCGT
GCGCGCTGGCGATACCCTTGTCGGCAACGATGTCTGGATAGGGACCGAGGCGATGATCATGCCCGGTGTCAGCATCGGGG
ACGGGGCTGTCATCGGCAGTCGTGCGCTGGTCACACGCGATGTCGAACCCTACAGTATTGTGGGCGGCAATCCGGCGAAG
TTCATTCGTAAGCGTTTCGATGAAGAGAACATTGCATTGCTTCTGGAGATGCAGTGGTGGGACTGGCCTCTGGAACGTCT
GCATGAGGCCATGCCGTTACTATGTGCCAGCCGCATCAGGGACCTGCACACCTACTGGCGTGGCTGGTGCGATACAACGC
GCTGA

Protein sequence : 
MSDSPFRSPFEGIPLSQQVTNPNIRVGRFSYYSGYYHGHGFDDCARYLAPDRDDVDRLVIGSFCSIGSGASFIMAGNQGH
QLEWAATFPFFYMQDEAAFSGAVDGFVRAGDTLVGNDVWIGTEAMIMPGVSIGDGAVIGSRALVTRDVEPYSIVGGNPAK
FIRKRFDEENIALLLEMQWWDWPLERLHEAMPLLCASRIRDLHTYWRGWCDTTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
catB8 YP_005797132.1 chloramphenicol acetyltransferase Not tested AbaR4e Protein 2e-69 75
catB3 AET25385.1 chloramphenicol acetyltransferase Not tested PAGI-2(C) Protein 3e-68 74
catB3 AFG30108.1 chloramphenicol acetyltransferase Not tested PAGI-2 Protein 3e-68 74

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deval_1323 YP_005702117.1 transferase hexapeptide repeat containing protein AY123251.gene2.p01 Protein 8e-70 75
Deval_1323 YP_005702117.1 transferase hexapeptide repeat containing protein AY740681.1.gene5.p01 Protein 1e-68 74
Deval_1323 YP_005702117.1 transferase hexapeptide repeat containing protein AF322577.2.gene4.p01 Protein 1e-68 74
Deval_1323 YP_005702117.1 transferase hexapeptide repeat containing protein NC_002516.2.878374.p Protein 2e-64 72
Deval_1323 YP_005702117.1 transferase hexapeptide repeat containing protein JF268688.1.gene6.p01 Protein 1e-59 69
Deval_1323 YP_005702117.1 transferase hexapeptide repeat containing protein CP001581.1.gene990.p Protein 2e-36 44