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Name : Deval_1307 (Deval_1307) Accession : YP_005702104.1 Strain : Desulfovibrio vulgaris RCH1 Genome accession: NC_017310 Putative virulence/resistance : Unknown Product : integrase catalytic subunit Function : - COG functional category : - COG ID : - EC number : - Position : 1493274 - 1494098 bp Length : 825 bp Strand : + Note : KEGG: dba:Dbac_2192 integrase catalytic region; manually curated; PFAM: Integrase catalytic region DNA sequence : TTGGCGGATTTCATACACAGCGAGCATGGCCTCAGTGAGCGGCGGTCATGCGCTGCGCTGGGGCTTAGCCGGACAGTGTA CCGGTATGAGCTCAAACCGAGAGATGATTCGCCGATCATTGAAGCGCTCCTGGGGCTGGCCGACAGGTATCCTCGTTACG GTTTCGGCAAGCTGTTCGCGGTATTGCGCCGACACGGTTTTCGCTGGAACCATAAACGCGTCTACCGGGTATATTGTCTT TTAAAGATGAACCTTCGGCGCAAAGGCAAGAAGCGCCTGCCCTCGCGAAACCCGCAACCACTGGCGGTTCCGCCATGCGC AAATGTCTGCTGGTCCATTGACTTCATGCATGACGCATTGGCTAGTGGTCAAAGGTTCAGGACGTTCAATGTGTTGGACG ACTTCAGCCGTGAGTGTTTGGCTATCGAAGTTGATACGAATTTGCCAGCGGCACGAGTCTTGCGAGTTTTGGACCGAATA GTGGCTTGGCGCGGGCTGCCTGCCAAATTGAGAATGGATAACGGGCCGGAGCTGATTTCGGTGCTGCTGGCCGACTGGGC CGAGAAAAACGGCGTGGCATTGGAGTTCATCCAGCCAGGCAAGCCCACACAGAATTCGTACATTGAGCGGTTCAACAAGA CCTATCGGGAAGAGGTTCTGGACTTCTATCTGTTCAAATCCCTTACAGAAGTGAAGGAAATTACGGAGAACTGGCTGCGG CAGTACAACGAGGAACGACCCCATGAGTCTCTTGGCGATTTGACCCCGGCAGAGTTCCTCCTGAAAAATTCACCCAAGGA AGTCTCTACTTTTGGATGGCACTAA Protein sequence : MADFIHSEHGLSERRSCAALGLSRTVYRYELKPRDDSPIIEALLGLADRYPRYGFGKLFAVLRRHGFRWNHKRVYRVYCL LKMNLRRKGKKRLPSRNPQPLAVPPCANVCWSIDFMHDALASGQRFRTFNVLDDFSRECLAIEVDTNLPAARVLRVLDRI VAWRGLPAKLRMDNGPELISVLLADWAEKNGVALEFIQPGKPTQNSYIERFNKTYREEVLDFYLFKSLTEVKEITENWLR QYNEERPHESLGDLTPAEFLLKNSPKEVSTFGWH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| trp1400B | CAB46580.1 | IS1400 transposase B | Not tested | HPI | Protein | 5e-87 | 64 |
| unnamed | ABR13540.1 | insertion sequence IS407 OrfB | Not tested | PAGI-8 | Protein | 5e-47 | 41 |
| XCV0439 | YP_362170.1 | ISRSO12 transposase (fragment) | Not tested | Hrp PAI | Protein | 7e-35 | 41 |
