Gene Information

Name : Deval_1138 (Deval_1138)
Accession : YP_005701937.1
Strain : Desulfovibrio vulgaris RCH1
Genome accession: NC_017310
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1328750 - 1329493 bp
Length : 744 bp
Strand : -
Note : KEGG: dde:Dde_2308 ATPase; PFAM: ABC transporter related; SMART: AAA ATPase

DNA sequence : 
ATGACCGCCGCTAACGAACCCATCATCAGCATCCGCAACGTCTGGAAGTTCTTCGGTGAGCTCACGGCCCTCCATGATGT
GAGTCTCGATGTGCAGGCCGGTGAGAAGGTCGTCATCATCGGCCCCAGCGGTTCAGGTAAGTCGACCCTGCTGCGCTCCA
TCAACCGTCTCGAGAACGTCGACAAGGGCAGCATCATCGTCGACGGCAAGGACATCCGGGCCGAGGACAGCGACATCAAC
GTCATCCGGCAGGATCTCGGCATGGTGTTCCAGAGCTTCAACCTCTTCCCCCACAAGACGGTGCTCCAGAACCTCACCAT
GGCGCCCATGCGCCTGCGTAAGGTTCCCCGGGACGAAGCGGAATCAAGAGCACTCGACCTGCTCAAGAAGGTGGGCATCA
GCGACAAGGCCAATGTCTACCCCGCCATGCTGTCCGGCGGTCAGCAGCAACGTGTCGCCATAGCCCGCGCTCTCGCCATG
AACCCCAAGATCATGCTCTTCGACGAACCGACGTCGGCGCTCGACCCCGAAATGATCGGAGAAGTGCTTGATGTCATGGT
GACCCTTGCCAAGGAAGGCATGACCATGGTGTGCGTGACTCACGAGATGGGCTTCGCGCGCGAAGTCGCAGACCGCATCA
TCTTCATGGACCACGGGCAGATTCTCGAACAGGGCACACCGCAGCACTTCTTCGAGGCGCCGGAACATCCGCGCCTTCAG
AAGTTCCTGCAACAGATTCTCTAA

Protein sequence : 
MTAANEPIISIRNVWKFFGELTALHDVSLDVQAGEKVVIIGPSGSGKSTLLRSINRLENVDKGSIIVDGKDIRAEDSDIN
VIRQDLGMVFQSFNLFPHKTVLQNLTMAPMRLRKVPRDEAESRALDLLKKVGISDKANVYPAMLSGGQQQRVAIARALAM
NPKIMLFDEPTSALDPEMIGEVLDVMVTLAKEGMTMVCVTHEMGFAREVADRIIFMDHGQILEQGTPQHFFEAPEHPRLQ
KFLQQIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 9e-30 42
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 9e-30 42
SAR0461 YP_039910.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 3e-37 42
SAS0419 YP_042546.1 ABC transporter ATP-binding protein Not tested vSa¥á Protein 2e-37 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Deval_1138 YP_005701937.1 ABC transporter NC_008702.1.4606598. Protein 2e-26 41