Gene Information

Name : qseB (ETAF_0401)
Accession : YP_005698017.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Virulence
Product : Two-component system response regulator QseB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 472236 - 472895 bp
Length : 660 bp
Strand : -
Note : -

DNA sequence : 
ATGCGCGTACTGTTAATTGAAGACGATCGCCTGATCGGCGACGGTATTAAAGCCGGATTGAGTAAGATGGGATTTACCTT
GGACTGGTTTACCGACGGGCAGCTAGGCATGACGGCGCTGGAGAGCGCGCCCTATGACGCCGTGATCCTCGACCTGAGCC
TGCCGGGCATCGACGGGCTGGAAATTCTGCGCCGCTGGCGCGAAGCCGGGCACGCGGAGCCGGTTCTGATCCTGACCGCC
CGCGATGCCCTGGAGCAGCGAGTGACCGGGCTACAGCAGGGCGCAGATGACTATCTGTGTAAGCCCTTCGCCCTGATCGA
GGTCGCCGCGCGCCTGCAGGCGCTGATCCGGCGCAACCACGGCCAGGCCCAGACCCTGCTCAGCCACGGCGCGGTGAGCC
TCGATCCCCTGAGCCTCACCGCGACCCTCGACGGTGCATCGCTGCCGCTAAAGCCCAAGGAGTTCGCCCTGCTGGAGCTG
CTGCTGCGCAACGCCGGGCGCGTGCTGCCGCGCTCGCTGATCGAGGAAAAGCTCTACAGCTGGGATGACGATGTCTCCAG
CAACGCCGTCGAGGTCCACATCCACCACCTGCGCCGCAAGCTGGGCAGCCACTTTATCCGCACCGTGCACGGCGTCGGCT
ACACGCTGGGAGACTCCTGA

Protein sequence : 
MRVLLIEDDRLIGDGIKAGLSKMGFTLDWFTDGQLGMTALESAPYDAVILDLSLPGIDGLEILRRWREAGHAEPVLILTA
RDALEQRVTGLQQGADDYLCKPFALIEVAARLQALIRRNHGQAQTLLSHGAVSLDPLSLTATLDGASLPLKPKEFALLEL
LLRNAGRVLPRSLIEEKLYSWDDDVSSNAVEVHIHHLRRKLGSHFIRTVHGVGYTLGDS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 1e-41 47

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005698017.1 Two-component system response regulator QseB BAC0487 Protein 3e-41 47
qseB YP_005698017.1 Two-component system response regulator QseB BAC0083 Protein 1e-35 44
qseB YP_005698017.1 Two-component system response regulator QseB BAC0638 Protein 2e-29 43
qseB YP_005698017.1 Two-component system response regulator QseB BAC0197 Protein 3e-36 42
qseB YP_005698017.1 Two-component system response regulator QseB BAC0308 Protein 2e-36 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
qseB YP_005698017.1 Two-component system response regulator QseB VFG0473 Protein 1e-39 45
qseB YP_005698017.1 Two-component system response regulator QseB VFG1390 Protein 4e-33 41