Gene Information

Name : ETAF_0349 (ETAF_0349)
Accession : YP_005697965.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Virulence
Product : Transcriptional regulatory protein basR/pmrA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 416761 - 417423 bp
Length : 663 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAATTCTGATCGTGGAAGACGATACCCTGATCCAGCAGGGACTGGCCCAGGCGATGGCGCGGGAGAACTACGCCTG
TGACTGTGCGGGCAACGCGGCGAGCGCCAGCGCGCTGCTGCAGAGCGGTCACTACAGCCTGATCATCCTCGATCTGGGGC
TGCCCGGTATGGACGGTGCCAGCGCGCTGCGTCAGTGGCGACGCGAGGGCATCGACGCGCCGGTGCTGATCCTGACCGCC
CGGGATACCGTCAGCGATCGGGTCGGCGGGCTGGACGCCGGCGCCGATGACTATCTGGTAAAACCCTTCGCGCTGGCCGA
GCTGCTGGCGCGCGTCCGTGCCCTGATCCGTCGCATGCAGGGACTGTGCAACAACGCTCTGCAGGTCGACGATATCCATC
TGGATCTCTCCAGCCAGCAGGTCAGCTGCGGCGGCCTGCCGCTGGAGATCACCCCCAAAGAGTTCGCTATCCTGACGCGC
CTGATGATGCGCGCCGGGCAGACCATCAGCCGCGAAGTTCTCCAGCAGGATCTCTACTCCTGGCAGGATGAGCTCAGCTC
CAACTCGCTGGAGGTACATATCCATAACCTGCGGCGCAAGCTGGGGAAAAACCGGATCAAAACCCTGCGCGGCGTCGGCT
ATCGGCTGGAGAAAACGCCGTGA

Protein sequence : 
MKILIVEDDTLIQQGLAQAMARENYACDCAGNAASASALLQSGHYSLIILDLGLPGMDGASALRQWRREGIDAPVLILTA
RDTVSDRVGGLDAGADDYLVKPFALAELLARVRALIRRMQGLCNNALQVDDIHLDLSSQQVSCGGLPLEITPKEFAILTR
LMMRAGQTISREVLQQDLYSWQDELSSNSLEVHIHNLRRKLGKNRIKTLRGVGYRLEKTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 1e-25 43
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 4e-29 42
copR AAC33719.1 regulatory protein CopR Not tested SPI-5 Protein 4e-25 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAF_0349 YP_005697965.1 Transcriptional regulatory protein basR/pmrA BAC0487 Protein 6e-55 65
ETAF_0349 YP_005697965.1 Transcriptional regulatory protein basR/pmrA BAC0083 Protein 2e-26 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAF_0349 YP_005697965.1 Transcriptional regulatory protein basR/pmrA VFG0473 Protein 1e-47 57
ETAF_0349 YP_005697965.1 Transcriptional regulatory protein basR/pmrA VFG0596 Protein 5e-26 43