Gene Information

Name : ETAF_2788 (ETAF_2788)
Accession : YP_005700382.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Virulence
Product : Transcriptional regulator, AlpA like protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 3188230 - 3188445 bp
Length : 216 bp
Strand : -
Note : -

DNA sequence :
ATGAATACAACCGATACAACCAATCAAAGCTTAATTCGTTTACCAGAAGTCTTGAAACGAACTGGTTTCGGCAAAGCCTG
GATCTATCGTCTGATCAGTGAAGGTCGGTTTCCGGCACCAGTGAAGATCGGTGTTCGTGCGGTTGCTTTTGTCGAAAGTG
AAGTTGACGAGTGGATTCAATCAGTTATCGAAACAAGTCGAAATAATGTTGCTTAA

Protein sequence :
MNTTDTTNQSLIRLPEVLKRTGFGKAWIYRLISEGRFPAPVKIGVRAVAFVESEVDEWIQSVIETSRNNVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 5e-09 51
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 7e-09 50
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 7e-09 50
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 5e-06 48
unnamed CAA21398.1 - Not tested HPI Protein 8e-06 48
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 7e-06 45
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 3e-08 44
Z1188 NP_286723.1 hypothetical protein Not tested TAI Protein 1e-05 43
Z1627 NP_287131.1 hypothetical protein Not tested TAI Protein 1e-05 43
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 8e-05 42
c5192 NP_757040.1 hypothetical protein Not tested PAI II CFT073 Protein 1e-07 42
unnamed CAD33739.1 hypothetical protein Not tested PAI I 536 Protein 8e-08 42
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 1e-07 41
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 2e-07 41
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 2e-07 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAF_2788 YP_005700382.1 Transcriptional regulator, AlpA like protein VFG1141 Protein 2e-09 50
ETAF_2788 YP_005700382.1 Transcriptional regulator, AlpA like protein VFG1480 Protein 3e-08 42
ETAF_2788 YP_005700382.1 Transcriptional regulator, AlpA like protein VFG1118 Protein 5e-08 41