Gene Information

Name : cadB1 (ETAF_0245)
Accession : YP_005697861.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Virulence
Product : Lysine/cadaverine antiporter membrane protein CadB1
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 288157 - 289476 bp
Length : 1320 bp
Strand : +
Note : -

DNA sequence : 
ATGGCTTCTGTAAAAAAAATCGGGCTTATCGCCTGTACCGGGGTGGTTGCCGGGAACATGATGGGCAGCGGTATCGCGCT
GCTGCCCGCCAACCTGGCAAGCCTAGGGTCAATTGCCGTATGGGGCTGGCTGATCGCGCTGGTGGGCGCCGTTTCTCTGG
CCTATGTGTATGCCCGACTGGCCACCAAAAACCCCCAGGAGGGTGGTCCGGTTGCCTACGCCGGTGAGGTCGGTGCCGCC
TTCGGGTTCCAGACCGGGGTGCTGTACTACCACGCCAACTGGATCGGTAACCTGGCTATCGGTATTACCGCCGTCTCTTA
TTTATCGACCTTCTTCCCGGTGCTTAACAGCCCGGTACCGGCGGGTATCGCCTGTATCGCTATCGTGTGGATTTTCACCT
TCGTTAACATGCTGGGGGGCGCCTGGGTCAGCCGCCTGACCACCTTGGGGCTGGTGTTGGTACTGATCCCGGTTATCGGG
ACCGGGATCGCCGGCTGGTTCTGGTTTGAGCCAACGACCTATATGGCGAACTGGAACACCTCCGGCGGCACGGATTATCA
CGCTATTATTAAAAGTATTCTGCTCTGCCTGTGGGCGTTTATCGGGGTGGAGTCTGCGTCCGTCAGTACCGGGATGGTGA
AGGATCCGCAGCGTAACGTCCCGCTGGCAACCATGATGGGGACTTTCCTGGCCGGTATCGTCTATATTGCGGCGACGCAG
GCTATCGCCGGGATGTATCCGGCCCATCAGATGGCCGCCTCCGGCGCGCCGTTCGCCATCAGCGCCTCGACCATGGTGGG
CAGCTGGGCTGGCCCGGTAGTGTCCGCCTTCACCGCCTTCGCCTGTCTGACGTCGTTGGGCTCCTGGATGATGCTGGTCG
GTCAGGCCGGCGCGCGTGCGGCCCATGACGGTAACTTCCCGAAAATCTACGGTGAGCTGGACAAGAATGGCCTGCCGAAG
AAAGGGCTGTTCCTGGCCGCGCTCAAGATGACCGTTCTGATGGTGCTGATCACCGTGATGAACGCCAGCGGCGGTAAGGC
CTCTGACCTGTTCGGCGAACTGACCGGCATCGCGGTGCTGTTGACCATGCTGCCTTACTTCTACTCCTGTATTGACCTGA
TCCGCTTTGATGGAGCCAACATCAAGAACGTACTGAGTCTGCTGGCGTCCATTCTCGGCTGTGTGTTCTGCTTTATCGCT
TTGATGGGGGCCAACTCGATCGAGCTGTCCGGTACCTTTATCGTCAGCCTGATCATTCTGATGTTCTACTCACGTAAGCT
GGGCTCCGCACAGGATAAAGGCAGCGCCCCGCGTACTTAA

Protein sequence : 
MASVKKIGLIACTGVVAGNMMGSGIALLPANLASLGSIAVWGWLIALVGAVSLAYVYARLATKNPQEGGPVAYAGEVGAA
FGFQTGVLYYHANWIGNLAIGITAVSYLSTFFPVLNSPVPAGIACIAIVWIFTFVNMLGGAWVSRLTTLGLVLVLIPVIG
TGIAGWFWFEPTTYMANWNTSGGTDYHAIIKSILLCLWAFIGVESASVSTGMVKDPQRNVPLATMMGTFLAGIVYIAATQ
AIAGMYPAHQMAASGAPFAISASTMVGSWAGPVVSAFTAFACLTSLGSWMMLVGQAGARAAHDGNFPKIYGELDKNGLPK
KGLFLAALKMTVLMVLITVMNASGGKASDLFGELTGIAVLLTMLPYFYSCIDLIRFDGANIKNVLSLLASILGCVFCFIA
LMGANSIELSGTFIVSLIILMFYSRKLGSAQDKGSAPRT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadB AAL67382.1 cadaverine/lysine antiporter Not tested PAI II CFT073 Protein 7e-156 80
cadB NP_756989.1 lysine/cadaverine antiporter Not tested PAI II CFT073 Protein 9e-156 80
unnamed CAD66196.1 putative lysin/cadaverin transporter Virulence PAI III 536 Protein 6e-134 67

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
cadB1 YP_005697861.1 Lysine/cadaverine antiporter membrane protein CadB1 VFG1671 Protein 4e-134 67