Gene Information

Name : ngrB (ETAF_2483)
Accession : YP_005700078.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Virulence
Product : NgrB
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2826861 - 2827736 bp
Length : 876 bp
Strand : +
Note : -

DNA sequence :
ATGAATAAATCTGTCGGCCTTCAGGCCCTTGAAAAACCACTGGCTTCGTTACCGCATACCCTACGCAATCTCGTTTTTGA
ACGTCTCCAACATCTGACTCACTACGAACCCGTCATTGGCATTATGGGCAAAACAGGTGCCGGTAAATCATCACTTTGCA
ATGCTCTGTTCCAGGGTGAAGTCACTCCGATCAGCAATGTGGAGGCCTGCACGCGTGAGGCGCTACACTTTAGACTTCGT
AATGGCAATCACAGCCTAATGGTTGTTGATTTACCTGGTGTGGGTGAAAGCGAGCAACGTGACGAGGAATATACAGCACT
TTATCGTCACATTCTGCCAGAACTGGATTTAGTGCTGTGGGTTATCAAAACCGATGACCGGGCACTGTCAGTGGATGAAC
ACTTCTATCGCAAGGTGATGCAGGATTATCAGAAGAGGGTTCTGTTCGTGGTTAATCAAGCTGACAAGGCCGAACCCTGC
CATCAATGGAATACCACCAGCAATACACCATCCCATAGCCAACAGTCGACAATTGAGGCCAAGCAGAGCGCTGTACAACA
GATATTCCTGCCGCACCATCCAGTCTGTGTTGTATCGGCCCGAACTGGTTGGGGGCTGGATGCGATGGTCGAGACAATGA
TGCGCAGCCTGCCTGACCGGGCCACCAGCCCACTGACGACACAGCTGCATGGCAGGCTCTGCACGGAGCCGGTAAAAAAG
CAGGCCAGGAACAGTTTCAGCCATGCCGTGGGAAAGGTGTTTGATGGCGTGGAGTCATCCCCTCTGCTTCCGGTCCCGGT
TCGGGCGGTCATTCGTACCGTACGGGAAACCGTTGTGTCAGTCGCACGGGCCGTCTGGGACTGGATATTCTTCTGA

Protein sequence :
MNKSVGLQALEKPLASLPHTLRNLVFERLQHLTHYEPVIGIMGKTGAGKSSLCNALFQGEVTPISNVEACTREALHFRLR
NGNHSLMVVDLPGVGESEQRDEEYTALYRHILPELDLVLWVIKTDDRALSVDEHFYRKVMQDYQKRVLFVVNQADKAEPC
HQWNTTSNTPSHSQQSTIEAKQSAVQQIFLPHHPVCVVSARTGWGLDAMVETMMRSLPDRATSPLTTQLHGRLCTEPVKK
QARNSFSHAVGKVFDGVESSPLLPVPVRAVIRTVRETVVSVARAVWDWIFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1210 NP_286745.1 histone Not tested TAI Protein 6e-85 61
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 6e-85 61
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 5e-83 60
unnamed AAL99256.1 unknown Not tested LEE Protein 9e-84 60
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 9e-84 60
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 1e-83 60
unnamed AAL08471.1 unknown Not tested SRL Protein 7e-84 60
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 4e-83 60
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 1e-83 60
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 1e-83 60
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 2e-83 59
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 3e-82 59
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 2e-83 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ngrB YP_005700078.1 NgrB VFG1674 Protein 5e-84 60
ngrB YP_005700078.1 NgrB VFG0654 Protein 2e-83 60
ngrB YP_005700078.1 NgrB VFG1062 Protein 4e-84 60