Gene Information

Name : ETAF_2475 (ETAF_2475)
Accession : YP_005700070.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Unknown
Product : Prophage CP4-57 integrase
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2807081 - 2808322 bp
Length : 1242 bp
Strand : +
Note : -

DNA sequence : 
ATGGCAAGAAAAACCAAGCCGTTAACCGATACGGAAATCAAAGCTGCCAAACCTAAAGATGCCGATTACCAGCTGTATGA
TGGTGACGGGCTTACTCTATTAATCAAGTCCAGCGGTAGTAAGCTCTGGCAGTTCCGTTACTACCGACCACTGACCAAAC
AGCGAACCAAACAGAGCTTCGGTGCCTACCCTACCGTCTCACTTTCTGATGCGCGTAAACTCAGAGCTGAATCTCGAGTT
TTATTAGCAAAAGACATTGATCCTCAGGAACATCAGAAAGAACAGGTGAGGAATTCTCAAGAGGCCAAAACCAATACCTT
CTTTTTGGTTGCCGAGCGTTGGTGGAATGTGAAGAAAACCAGCGTAACAGAGGACTATGCCGACGATATCTGGCGCTCGC
TTGAGAGAGATGTTTTCCCAGCAATCGGTGATATCAGTGTCACTGAGATTAAGGCTCATACTCTGGTTAAAGCAGTTCAG
CCGGTTCAGGCAAGAGGTGCATTAGAGACTGTTCGCCGCCTTTGTCAGCGCATTAACGAAGTCATGATTTACGCGCAGAA
CACGGGCCTGATTGATGCGGTTCCCAGCGTAAACATTGGGAAAGCATTCGAGAAACCGCAAAAGAAAAACATGCCAAGTA
TTCGACCGGATCAACTTCCACAGCTAATGCAAACTATGCGTACGGCAAGTATCAGTATGTCCACACGATGTCTGTTCATG
TGGCAGCTTCTCACCATTACCCGCCCTGCCGAAGCTGCTGAGGCTCGATGGGATGAGATCGATTTTGATGCTAGCGAATG
GAAAATTCCAGCAGCTCGAATGAAGATGAATCGGGACCATACAGTTCCATTATCTGATGGAGCTCTCACTATTCTGGAAA
TGATGAAGTCTCTCAGTGGTGGCCGGGAGTTTATCTTTCCCAGTCGCATCAAACCAACCCAGCCGATGAACAGCCAAACA
GTGAATGCAGCGCTCAAGCGTGCTGGTTTAGGAGGAGTACTCGTTTCACACGGCTTACGTTCTATCGCCAGTACGGCACT
CAATGAGGAAGGATTTCCTCCTGATGTTATTGAGGCAGCACTTGCTCATGTAGACAAAAATGAGGTACGTCGCGCTTATA
ACCGCAGTGATTACCTTGAGCAACGTCGTCCGATGATGCAATGGTGGGCTGATTTTGTTAGCAAGGCCGACAGAGGGAGC
ATTGTTGAAACTGGGAAAACGAGGTTAAAACTTGTGGGCTGA

Protein sequence : 
MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSFGAYPTVSLSDARKLRAESRV
LLAKDIDPQEHQKEQVRNSQEAKTNTFFLVAERWWNVKKTSVTEDYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQ
PVQARGALETVRRLCQRINEVMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISMSTRCLFM
WQLLTITRPAEAAEARWDEIDFDASEWKIPAARMKMNRDHTVPLSDGALTILEMMKSLSGGREFIFPSRIKPTQPMNSQT
VNAALKRAGLGGVLVSHGLRSIASTALNEEGFPPDVIEAALAHVDKNEVRRAYNRSDYLEQRRPMMQWWADFVSKADRGS
IVETGKTRLKLVG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VC0395_A0372 YP_001216328.1 phage family integrase Not tested VPI-1 Protein 4e-109 54
int AAK20773.1 integrase Not tested VPI Protein 3e-109 54
int AAK20803.1 integrase Not tested VPI Protein 3e-109 54
unnamed AAA82714.1 integrase Not tested VPI Protein 3e-109 54
VC0847 NP_230494.1 phage family integrase Not tested VPI-1 Protein 4e-109 54
VC0516 NP_230167.1 phage integrase Not tested VSP-2 Protein 2e-107 50
VPI2_0001 ACA01818.1 phage family integrase Not tested VPI-2 Protein 1e-84 46
VC1758 NP_231394.1 phage family integrase Not tested VPI-2 Protein 3e-84 46
VC0395_A1357 YP_001217300.1 phage family integrase Not tested VPI-2 Protein 3e-84 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAF_2475 YP_005700070.1 Prophage CP4-57 integrase VFG1092 Protein 1e-84 46