Gene Information

Name : ybbA (ETAF_2437)
Accession : YP_005700032.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Resistance
Product : ABC transporter ATP-binding protein YbbA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2768800 - 2769486 bp
Length : 687 bp
Strand : -
Note : -

DNA sequence : 
ATGCCAGCGCAAAACGTAATTGAAGTTCATCATGTCGCCAAACGGGTTGGTGAGGGTGAAAACCAGATCTCCATCCTTAC
TGCTGTCGACCTGGTTGTCAAACGCGGACAGAGTCTGGCGCTGATCGGCGAGTCGGGATCGGGAAAATCGACGCTGCTGG
GGATCTTGGCCGGGCTGGACGATGCCAGTGCCGGCGAGGTGCGTCTGCTGGGGCAGCCTCTGTCACAGCTGGATGAGGAG
GGGCGCGCCGCCCTGCGCGCCCGCGATATTGGCTTTGTGTTTCAATCTTTTATGTTGGTGCCGACCCTGACGGCGCTGGA
GAACGTACAGCTGCCCGCGCTGCTGCGCGGCGAGCGCGAGCACGACAGCCGCCAGCGCGCCGCGGCGCTGCTGACGCAGC
TGGGGCTGGGGCAGCGTCTGCGCCACCTGCCGGCCCAGCTCTCCGGCGGTGAGCAGCAGCGGGTCGCGCTGGCGCGCGCC
TTTAGCGCCCGGCCGCAGATCCTGTTTGCCGATGAACCGACCGGCAACCTGGATCGCCAGACCGGCGATCGCATCGCCGA
TCTGCTGTTTGAGCTGAACCAGCGCCAGGCGACGACGCTGGTGATGGTGACCCACGATGTTCAGCTGGCTGCGCGTTGCC
AGCGGCGGCTGCGCCTGGTGGACGGAACGCTGCGGGAGGTCGCGTGA

Protein sequence : 
MPAQNVIEVHHVAKRVGEGENQISILTAVDLVVKRGQSLALIGESGSGKSTLLGILAGLDDASAGEVRLLGQPLSQLDEE
GRAALRARDIGFVFQSFMLVPTLTALENVQLPALLRGEREHDSRQRAAALLTQLGLGQRLRHLPAQLSGGEQQRVALARA
FSARPQILFADEPTGNLDRQTGDRIADLLFELNQRQATTLVMVTHDVQLAARCQRRLRLVDGTLREVA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-27 44
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 44
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 4e-27 44
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 4e-27 44
cur_1502 YP_001800896.1 cell division ATP-binding protein FtsE Not tested Not named Protein 3e-20 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybbA YP_005700032.1 ABC transporter ATP-binding protein YbbA NC_008702.1.4606598. Protein 5e-26 49
ybbA YP_005700032.1 ABC transporter ATP-binding protein YbbA CP001581.1.gene798.p Protein 4e-30 42
ybbA YP_005700032.1 ABC transporter ATP-binding protein YbbA NC_012469.1.7686878. Protein 2e-31 42