Gene Information

Name : ETAF_2412 (ETAF_2412)
Accession : YP_005700007.1
Strain : Edwardsiella tarda FL6-60
Genome accession: NC_017309
Putative virulence/resistance : Virulence
Product : Attachment invasion locus protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2742280 - 2742852 bp
Length : 573 bp
Strand : -
Note : -

DNA sequence : 
ATGAAAAAAAGTTTTTGCGCAGTATCTCTGTTGATTTCCCTGGGTGCCGCTGCGCCGGTAATGGCTGAGGGCCAGACGGT
TTCTCTGGGCTATGCTCAGGCCAAGGTGGCTGATTTTAAAAATATTGCCGGGGTTAACCTGAAATATCGCTATGAGTGGG
ACTCTCCCCTTAGCCTGATGACCTCCTTTACCTATATGAGCGGCAGCAAGGCGTTCAGTGAAAGCACGGGGCTGGAGTAT
TCTCGCGGTAATGGGGATCTAAAATATTACTCTCTGGCGGCGGGCCCGGCCTGGCGGATTAATGATAGCGTCAGCGTTTA
TGGGCTGCTGGGGGTTAACGTGAATAAGACCACGGTCTCCGCCGCCTGGCGCGACGTGTGGGTCGGCGGCTATGAAGAGG
GCAGTCTGCAGCAAACGCGCAGTAAGGGGTCGCTGATGTACGGCGCCGGTCTGCAGATCAACCCGCTGGCCAACTGGAGC
ATCGATGTGGGCTATGAGGGATCGCGCGTCGATCTGGGCGGCAGCAAGCACAGCATCAACGGCTTTAACCTGGGTGTCGG
CTACCGCTTCTAA

Protein sequence : 
MKKSFCAVSLLISLGAAAPVMAEGQTVSLGYAQAKVADFKNIAGVNLKYRYEWDSPLSLMTSFTYMSGSKAFSESTGLEY
SRGNGDLKYYSLAAGPAWRINDSVSVYGLLGVNVNKTTVSAAWRDVWVGGYEEGSLQQTRSKGSLMYGAGLQINPLANWS
IDVGYEGSRVDLGGSKHSINGFNLGVGYRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z4321 NP_289546.1 PagC-like membrane protein Not tested OI-122 Protein 1e-31 48
unnamed ADD91732.1 putative PagC-like membrane protein Not tested PAI-I AL862 Protein 2e-32 48
pagC AGI37340.1 PagC Virulence OI-122 Protein 5e-23 47
pagC AGI37347.1 PagC Virulence OI-122 Protein 5e-23 47
Z4321 AAQ19134.1 putative PagC-like membrane protein Not tested PAI I CL3 Protein 2e-31 47
pagC AGI37348.1 PagC Virulence OI-122 Protein 2e-23 47
pagC AGI37341.1 PagC Virulence OI-122 Protein 1e-22 46
pagC AGI37349.1 PagC Virulence OI-122 Protein 1e-22 46
pagC AGI37352.1 PagC Virulence OI-122 Protein 1e-22 46
pagC AGI37351.1 PagC Virulence OI-122 Protein 3e-23 46
pagC AGI37343.1 PagC Virulence OI-122 Protein 2e-22 45
pagC AGI37353.1 PagC Virulence OI-122 Protein 2e-22 45
pagC AGI37337.1 PagC Virulence OI-122 Protein 2e-22 45
pagC AGI37342.1 PagC Virulence OI-122 Protein 2e-22 45
pagC AGI37344.1 PagC Virulence OI-122 Protein 2e-22 45
pagC AGI37346.1 PagC Virulence OI-122 Protein 2e-22 45
pagC AGI37350.1 PagC Virulence OI-122 Protein 2e-22 45
pagC YP_216243.1 PhoP regulated protein: reduced macrophage survival Not tested SPI-11 Protein 9e-24 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ETAF_2412 YP_005700007.1 Attachment invasion locus protein VFG0442 Protein 8e-22 44